Oreochromis niloticus (Nile tilapia): 100700705
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Entry
100700705 CDS
T06104
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100700705 (chd1)
03036 Chromosome and associated proteins [BR:
onl03036
]
100700705 (chd1)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100700705 (chd1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100700705 (chd1)
SLIK complex
100700705 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
CHDCT2
Motif
Other DBs
NCBI-GeneID:
100700705
NCBI-ProteinID:
XP_003439500
Ensembl:
ENSONIG00000011219
LinkDB
All DBs
Position
LG7:complement(7890474..7917402)
Genome browser
AA seq
1791 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQRQSS
SNSASDEDSSSSDESDSSSGSKMRRKSGSSDSGSGSESGSGSGSDSSAEESETASDYEPS
HKIKSRKPPTKMNFRNGKKSNTQRKKAQKSSSSDDEDDNFKKITSGGPRRQATVNISYKE
DEELKTDSDDLVEVMGEDVPQPEEDEFETLERVMDSRIGRKKATGSSTTVYAIEADGDPN
ANFDPNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKKWLK
AASPEDIEYFNCQEELMDDLRSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWE
DGGLIAKKFQKCIDDYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPAYIGGDGLELRDYQ
LDSLNWMAHSWCKSNSCILADEMGLGKTIQTICFLNYLFNEHQLYGPFLLVVPLSTLTSW
QREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHSHSKRLKFNILLTTYEILLKDKSFLGS
VNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
HSWELFEDEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQY
YKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQHLIR
SSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKR
QVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEEL
SAILKFGAEELFKEQEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS
MMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQIYQNAN
EGRQSRNRRYSGSDSDSTSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPL
ERLDAIARDAELVDKSEHDLKRLAETVHNGCLRTLRENPCGPEKNSGGRRGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKAIPADPEERKKYVIPCHSKAAHFDIEWGKEDDSSLLIG
IYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQK
QAGNASSRKRKPRSKKSKTQKSTKTDEMVKSPSSDLPSDKRSDDEDEMEADKDLAPVKLP
NRRSRADRLVVKEEEDEEDDEEENYDEECEQDASSSEEQEVKEREIKKEIKKEKKEESFE
IKDTKELKEKKETKPLEVVHKQEESKEKNEAKNEVRERTKKTYDTPVHITASGENVQASE
DSEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE
YSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAVKKRQENAQALEQNTRSINAHGYR
HADIERLKDSSHQDESSRDSYSSDRHQPSGRHFESSTSKERHSSDSHRKSTAGESRKRPY
SSFSNGKDHRDHYRPDSRDRDKQDRYYDDSKHRKLEEFRSSRDHRLDMKDHHSDHRSSYR
YHSEWQTEQRGSASGPRSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagtggagaatccagtaattct
gatgatgaatccggttctggatcgggctcagcttcaggatccggctcaggctcgagttcc
agctcttccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagccaatccgattctgacacagaaaaatcaaaggagaagatcgaaccaccaaataag
tcaaacattgatggagctgagttctggaagtcaaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcttcagcagcagcagcaacaacagagacaaagctca
tcaaatagtgcatcggatgaggactcttcaagtagtgatgaatctgactcctccagtgga
tccaaaatgagaagaaagtcaggttcttctgactctggatcaggttcagaatctggtagt
ggttctgggtcagactcatcagcagaagagtctgaaacggcatcagactatgagccaagt
cacaaaatcaaaagcaggaagcctccaaccaagatgaactttcgaaatggaaaaaaaagc
aacacccagagaaaaaaagcccagaaaagttcatcatctgacgatgaggatgataacttt
aagaaaattacatctggagggccacggcggcaagccacagtcaacattagctataaggag
gacgaggagctgaagacggactcagatgatctggttgaagttatgggtgaagatgttcca
cagcctgaagaagatgagtttgaaacactggagagagtaatggacagcaggatagggagg
aaaaaagcaacaggcagttcaacaactgtatacgctatagaggcagatggagatccaaat
gcgaattttgatcccaacaaagaagctggtgatatccagtatttgataaagtggaagaac
tgggcccatatccataacacctgggagactgaggagacactcaagttacagaatgtcaag
ggcatgaagaaattggacaattttaagaagaaggaccaggagaagaaaaaatggttgaag
gcagcgtctccagaggatattgaatatttcaattgtcaggaagaattaatggatgacctg
cgttctcagtaccagcttgtagagcgaataataggacattcaaaccagaagtcagcagct
ggttatccagactacctgtgcaaatggcagggcttaccgtactcggagtgtagttgggaa
gatggtggtctgattgctaaaaaattccagaaatgcatcgacgattacatgagcagaaac
caatctaagaccattccattcagagactgcaaggtgctgaaacagagacctagatttgtg
cccatgaagaagcaaccagcttacataggaggtgatggtttggagctcagagactaccag
ttagacagtttgaactggatggcccactcctggtgcaaaagcaacagttgcatccttgct
gatgagatggggttagggaagacgatccagaccatctgcttcctgaactacctgtttaat
gagcaccaactgtatgggcccttcctgctggttgtgcctctttcaacactaacgtcttgg
cagagagagatccatctgtgggcccctcaaatgaatgttgtggtctacctgggagacatc
agcagcaggaatatgatcagaacacatgagtggatgcattctcacagcaagagactgaaa
tttaacatcctccttacaacatatgagattctcctcaaagacaagtcatttttgggcagt
gttaattgggccttcattggtgtggatgaggcgcaccgactgaaaaatgatgactccctc
ctctacaagacaatgatcgacttcaagtccaaccacaggcttctaataacaggaacacca
ctgcaaaattccctgaaagagctctggtccctgctgcacttcattatgcctgaaaagttt
cattcgtgggagctgtttgaggatgaacatgggaaaggtagagactctggctacaccagt
cttcacaaagagctggaaccttttctactgcgccgtgtcaagaaggatgtggagaaatct
cttccagctaaagtggagcagatcctcagagtggaaatgagtgccattcagaaacaatat
tacaagtggatcctaacaaggaactacaaggctctgagtaaaggtaccaaaggcagcacg
tcaggtttcctcaacatcatgatggagttgaagaagtgctgtaatcactgttaccttatt
aaacctccagaggacaatgagttccttaacagagctgaagctttacagcatctgatacgc
agcagtggaaagctggttctcttggacaaacttttggtgcgtttgaaagaacggggacac
agagttctcatcttctcccagatggtacgaatgcttgatatcctggctgaatatctgagg
agcagacagttcctgtttcagcgattagatggctccatcaaaggggagatgaggaagcaa
gcattggaccactttaatgctgagggttcagaggatttctgcttcttgttatctacacgt
gctggaggtctgggcatcaatctggcttcagctgacacagtggtcatctttgactcagac
tggaacccccaaaatgacctgcaggcgcaagccagagcccacaggattggacagaaaaga
caggtgaatatctaccgactggtaacaaagggttcagtggaggaggacatcattgagagg
gcaaagaagaaaatggtgctagaccatcttgttattcagaggatggatacgactgggaaa
actgtcctccatacaggatctgctccgtccagttcagcaccattcaacaaggaggagctc
tctgcaatcctgaagtttggggctgaggagcttttcaaagaacaagagggggaggagcaa
gagcctcaggaaatggacattgatgagatcctcaaaagagctgagaccagggaaaatgac
cccggaccttcaacagtgggagaagaactgttgtctcagtttaaggtggccaacttctcc
atgatggaggatgaggaaatagacatcgactctgagcgaagtcagcggagttgggatgat
atcattccagaggaacaaaggaggagaatggaagaggaggaaagacagaaagagctggaa
gaaatctatatgctaccacgcatgaggaattgtgccaaacagatttatcagaatgcaaat
gagggccggcaaagtagaaacaggagatactctggttccgacagtgactccacatctgat
cgaaagaggccaaagaaacgagggcggcccagaaccattccaagggaaaatatcaaaggt
tttagcgatgctgagatccggaggtttgtcaagagctacaaaaaatttggaggaccactg
gaaaggttggacgctattgctcgtgatgctgaactcgtggataagtctgagcatgacctg
aaacgcttggcagagactgttcacaatggatgtttgagaacactacgagaaaacccctgt
gggccagagaaaaattcaggggggagaagagggaaggtgaaagggcctacgttcaggatc
tctggagtccaggtgaatgccaagcttgtgatctcccatgaggaagagctggctccactg
cacaaggctattcctgctgacccagaggagagaaagaagtatgtcattccatgtcactca
aaggcagcacattttgacattgagtggggaaaggaagacgactctagcctcctcatagga
atctacgagtatggttatggcagctgggagatgattaagatggacccagaccttaatctc
acacacaagctcctgccagatgaccctgacaagaaaccacaagccaaacagttacagacc
agagcagactacctcatcaagttactgagcaaggacttggccaaaaaagaagcacagaaa
caagcaggaaatgccagctcacgaaagaggaaacccagaagtaaaaagagcaaaactcaa
aagtcaacaaagacagatgagatggttaagagcccatcctcagatctcccatcagacaag
aggtcagatgatgaggatgaaatggaggcagacaaggatctggcacctgtgaagctacca
aaccgacgaagccgagcagacaggttggtggttaaagaggaggaggatgaggaagatgac
gaggaagagaactacgatgaggaatgcgagcaggacgcttcctcatcagaggagcaggaa
gtcaaagagagggagataaaaaaagaaatcaaaaaggagaagaaggaggaaagctttgaa
attaaagacacaaaggagctaaaagagaaaaaagaaacaaaacctcttgaggttgtacat
aaacaagaggaaagcaaagaaaagaatgaagccaagaatgaggtacgagaacggacaaag
aaaacttatgacacgccggtccatataacggctagtggagagaatgtgcaagcatctgaa
gattctgaggaactggatcagaggacctttagtgtgtgtaaagagaggatgcgcccagtg
aaagcagctctgaagcagctggacagaccggagaaagggctgtcagagcgcgagcagctc
gaacacacacggcagtgcctcataaagataggagaccacataaccgagtgtttgaaggag
tattcaaatccggacctgatcaaacagtggagaaaaaacttgtggatatttgtttccaaa
ttcactgagtttgatgcaagaaaactacacaaactttataagcatgcagtaaagaaaagg
caagagaatgcccaggcattggagcagaacactagaagtataaacgcccatggctacaga
cacgcagatattgaaaggctaaaggacagctctcaccaggacgagagcagcagggacagc
tacagctctgacaggcatcagccttcaggaagacactttgagagcagcaccagtaaggag
agacacagctctgactcccacaggaaatccacagcaggagagtcccgaaaaaggccgtat
tcctctttcagcaacggaaaagaccacagagaccactacagaccagacagcagggataga
gacaaacaggacagatactatgacgacagtaagcacaggaagttagaggaattccgcagt
agcagagaccaccggctggacatgaaggatcatcactcagaccaccgctcttcctaccgc
taccactcggaatggcagacagagcagcgaggctcagccagtgggccgcgctcaccctac
gactcccggtcaccactggggcaccgctcaccttttgactactcatcagaccacaagagc
acaccagagcagatttggagcagccgcaaaacataa
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integrated database retrieval system
