Oreochromis niloticus (Nile tilapia): 100700715
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Entry
100700715 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100700715
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100700715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
100700715
NCBI-ProteinID:
XP_013124355
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All DBs
Position
LG23:11910052..11929286
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AA seq
964 aa
AA seq
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MGQKDHVEAGAGHILDLGLDLEYLHVAGGDRQAGGADGPPAMEEQGESTAGSPPLTVLEE
NSGSDAEGESALTSSSTLAPGTDSDGGDGGLTHSKNTHQPLCRTQCVDLGTEGPPEPPSE
LLAELECDAHAQSTLDSPCEHLPEPPPSLSASEPGYEAGGKEYQAKLEFALKLGYSEETV
RLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGLLASTSSSSSSSSSCGCSDLLEGQRS
DSPCHSDSLCDQDNLRPVVIDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHQDITVFVP
AWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGII
VSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPE
QKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVVSKNQGDAGLVKSHS
VPAGSIDAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRVEVQKNTVCGSSTSSSSSTSGS
CGGSISMSPAPGGPPSTLGLPQEQQARAVMPHGHLPAPSHDLYPHCESPDLSYYSVTRAY
SGLSLSSRRSPDCRFPNDTDLRLGSAGSECSSESSVSCGSSCDSYGERQCPGCPRTPYWK
TLSIFLIPTADCTPIMPHLAMNFVACILPNTQTFSTATRPAQDYTLTTCAARGQSCAHDP
PPLEAPPKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPAPPGSPLGRCLAPTRAESV
SDSHLYEHLSTSHHHHRPKALPSWDKYYRQPPLPPSRYEPPTYQSLPDTRQSSWHTPPWA
QDGYGQHHSSHPALHPSPTHYLSHPPPPAHSPCPPHPSSTPLPPYPPHSSHLTVPSHASP
SYMSQHPESPAHSRYGDAREKVYINLCNIFPSDLVSRVMARSPHITDPQQLAAAILAEKA
QTGY
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggtgcaggccatatcctcgacctggggctggat
ttggagtatctacacgtagcggggggtgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggagagcaccgctggctcccctccactgaccgtcctagaggaa
aacagtgggtccgacgcagagggcgagtcagcgttgacctccagctccaccctcgctcca
ggtaccgactcggatggaggagacggagggttgactcacagtaagaacacccaccagccg
ctctgccggacccagtgtgtggacttaggcaccgaaggccctcccgagcccccatctgaa
cttctagcagagcttgaatgtgacgcccatgcccagtccacgctcgactccccgtgcgag
cacctgcctgaacctccacccagtctgtctgcttcagagcctggctatgaggctggtggg
aaagagtaccaggctaagctagagtttgccctcaaactcggctactctgaggagacggtg
cgactggtgctgtctaagctcggccctgacaccctaatcaatgacatactgggagagctg
gtcaagctgggcaccaagtcagacagtgagcagccggctggattattagcctctacctca
tcctcttcatcttcctcatcctcctgtggttgttctgatttgctggaaggccagaggtca
gactcaccctgtcattcagactctttgtgtgaccaggacaacctgcggccagtcgtgata
gatggcagcaatgtagccatgagccatgggaacaaggaagtgttttcctgtcagggcatc
cagctggctgtagattggttcctcgagcgcggccatcaagacatcacagtttttgtgcct
gcgtggcggaaagagcagtcccgacccgatgcccctataacagatcaggagatcttacgt
cgcctagagaaggaaaaaatcctggtgttcacgccttcacggcgtgtccaaggtcgacgt
gtggtctgctatgacgaccgtttcattgtcaagctggcctatgagtcagatggcatcatc
gtctccaacgacaactacagagacctggctaacgagaagcccgagtggaagaagttcata
gatgagcggcttctcatgtattcctttgtcaatgataaattcatgccgccagatgaccct
cttggtcgtcacggccccagcttagacaacttcctgagaaaaaggcccgtcatgcctgag
cagaagaagcagccttgtccatacggaaagaagtgtacttacggtcacaaatgtaagtac
taccacccggagcgaggcgcccaacctcagcgtgccgtggctgatgagctgcgtgccagc
gccaagacctgcgtcgtctcaaagaaccagggcgacgccgggctggtgaagagccacagc
gtgccagctggcagcatcgacgccaagaaaggcgcaccgaaaaggcagtcggaccccagc
atccgagctctgtcatacagcgacgccgaagagaagctgctggccaaagggagggtggag
gtgcagaagaatactgtgtgtggcagcagcaccagcagtagcagctccactagcggtagc
tgcggtgggagtataagcatgtccccggccccaggaggcccaccatccactcttggcctc
ccacaagagcagcaagcgagagcagtgatgcctcacggtcacttaccagcccccagccat
gacctttaccctcactgtgagtctccagacttaagctactattcagtaacacgtgcttac
tcaggcctgagcctctcctccagacggagcccagactgtcgcttccccaacgacacagac
ctgcggctgggctcagccggctctgagtgcagcagcgaaagcagcgtcagttgcggcagc
agctgcgactcgtacggcgagaggcagtgtcccggatgcccccggaccccttactggaag
acgctgtccattttcctaatccccacggccgactgtactcccatcatgccacatctagcc
atgaactttgtggcctgcatcctgccgaatacacaaacattcagcacagccacacgccca
gcacaggactacacccttaccacctgcgccgcacgcgggcagagctgcgctcatgatccg
cccccactagaggctcccccaaagcggcccctctaccccctgccccctcatctccagcac
caaccgctgactgcgcggtccagctgcccaggcgactaccactctctgccgcagtccaac
cccgcaccccctggctcaccccttggccgctgcctggccccaacgcgagcagaaagtgtg
tccgactcacacctgtacgaacacctctccacatcacaccatcaccaccgaccaaaagcc
ctgcccagctgggacaagtactacaggcagccgccgctgccgccatccagatacgagccg
cctacctaccaaagcctgccagacacacggcagtcgtcctggcacactcctccatgggcg
caagacggctacggccagcatcactcctctcacccagctctccacccatccccaactcat
tacctcagccacccaccgcccccagcccactctccttgcccgcctcatccatccagcacg
cctctcccgccatacccacctcacagctctcaccttaccgtgccctcccatgcctctccc
tcctacatgtcacagcacccagaatcccccgcgcacagtcgctacggcgatgcgagggag
aaagtgtacataaacctgtgcaacatcttcccctcagacctggtaagccgggttatggcc
agaagcccccacatcacagacccccagcagctggcagctgccatccttgcagaaaaagcc
caaacaggctactga
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