| Entry |
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| Name |
(RefSeq) collagen alpha-5(IV) chain isoform X1
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| KO |
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| Organism |
onl Oreochromis niloticus (Nile tilapia)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:onl00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100700747
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100700747
09142 Cell motility
04820 Cytoskeleton in muscle cells
100700747
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:onl04147]
100700747
00536 Glycosaminoglycan binding proteins [BR:onl00536]
100700747
Exosome [BR:onl04147]
Exosomal proteins
Exosomal proteins of other cancer cells
100700747
Glycosaminoglycan binding proteins [BR:onl00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
100700747
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG14:complement(40464276..40494246)
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| AA seq |
1589 aa
MGFPGPQGPPGEKGQRGDEGPTGAAGLKGHMGSLGVPGFPGLDGVPGHPGPAGGPGRPGL
DGCNGTRGDKGKAGLPGEQGRDGELGFPGPKGYPGDQAVYFIRYPGVTGDAGPSGCPGLQ
GEQGFSGSKGATGSPGPKGQDGVPGSPGSRGSPGERGRSLPGQKGDEGDQGLQGRPGPFE
YVDPPEDLYIKGDKGSRGVKGVCGIDGLPGLDGPPGMEGEKGILGLPGPRGLPGQPGLRG
NKGVKGIQGSSGLPGLIGRKGPKGKRGDPGPPGVLRVADITYTGRVGDPGSPGPHGLNGD
RGRMGIPGAPGLPGRSILGLRGVVGQKGVPGCKGVRGDPGQISTEKPTPGEPGKPGRPGF
RGPKGQQGVPGTYCLPGASGPPGDPGVSGPTGFQGSLGIKGSCGGCSCGVPLVLRGAPGP
MGDLGFPGFQGSPGPTGPRGEYGVPGDTGETGEQGRAGFPGFKGFKGQKGDLTVEDIEGE
KGNKGQQGPAGRQGFPGRRGQTGPPGVPGNPGFQGESFSSFPGERGLRGTTGLKGYLGPP
GPRGQGADGAVGKHGLPGDPGPTGSCGPPGLKGVKGDPPPFRPIRPGGPGEKGDLGSAGY
AGSQGPPGFPGGIGSDGPKGDNGKDGLPGIPGKQGPQGVTGDYGDEGPEGFSYDGDPGSP
GLRGSAGLRGPTGDSAVGLPGSIGFPGTRGPQGPKGVPGNPGQHGLPGISGLHGCRGAKG
QKGDDGAPGITGCPGPTSNRCDPGKPGTMGQSGFRGSTGAQGISGDKGEIGNVGSEGIGP
KGSVGASGLPGVRGKPGGQGLPGLSGSSGLQGTGGPKGLTGPWGWEGVPGNPGKPGVPGD
LGRTGERGFNGRDGGQGIEGPKGQKGFQGPTGPPGPTNYILIKGKRGNPGHPSTVGFTGP
RGSKGMQGAAGKPGHPGCDGPPGIVGPPGPPGPCGKQGPVGPPGLKGFEGYCGFPGNVGD
PGDKGCTGKPGEPGSPGCKGPKGNKGESIGCPGPNGERGPRGDKGHLGPPGSPGDLGGLG
FTGAPGEKGCRGEKGHCGSIGPRGVIGPPGPRGQPGTPGIQGKCGGDGPPGHEGCRGLKG
PPGPLGLHGLDGLKGEKGAIGTRGRGFPGVKGSLGPPGDKGPPGHQGLCGTSQPGPPGYK
GPFGPKGPPGKCGPPGKPGPDCKTPIKGPCGDPGCPGPDGEPGNLGEIGDPGQNPPIRGD
IGDNGNVGCQGPKGPRGCPGHIGTQGCTGYPGQKGMRGDTGLLGIPGPRGCKGVPGHCGS
PGLPGPPGVHGPKGEKGDTLDPALISPPKGPPGETGSTGQFGHPGLNGEQGPCGPKGDKG
DYGPQGCKGCDGPPGLKGDKGEPGLPGESGVVGQKGNRGPEGEKGSHGPTKELNLGLLVV
HSQSANTPRCPGNMNTLWEGFSLLYLEGQERAHTQDLGQPGSCMRVFSTLPFAPCNKHTC
SYASRNDKSYWLTTMEPVPREHVSGVNIKKYISRCVVCEAPSLPIAVHSQSSQSVECPEN
WTELWDGYSFVMHTGAGDEGGGQPLTSSGSCLKAYKAQPFVECQGPRGTCHFFANMYSFW
LTTLTDPAMLTNDQEQRRSIAKCKVCMRL |
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| NT seq |
4770 nt +upstreamnt +downstreamnt
atgggcttcccgggtcctcaggggcctccaggagagaaaggccagagaggagatgagggg
ccaacaggagctgcaggcctgaaaggacatatgggatctcttggtgttcctggttttcca
ggtttggatggagttccgggacacccgggacctgctggaggtccaggacgtccaggtctg
gatggatgtaatggaactagaggagacaaggggaaagctggccttccgggagaacaagga
cgtgacggagaactgggttttccaggaccgaaaggatatccaggagatcaggcggtgtac
ttcatacgttaccctggagtgactggagatgctgggcccagtggatgtcctggtctgcag
ggtgagcagggcttctcgggatcgaagggagcaacgggttctccaggaccgaaaggccaa
gacggtgtacctggaagcccgggttctcgaggttcacccggggaaagaggtcgatctcta
cctggacagaaaggagacgagggggatcagggtttgcagggacgtccagggccgtttgag
tatgttgaccctcccgaagacctctacatcaaaggagacaaaggctcccggggagttaaa
ggagtctgtggaattgacggactgccgggtctggatgggccacctgggatggaaggggag
aaggggattttggggcttcctggaccaaggggactccctggacaacctggtctccgtggg
aacaaaggagttaagggaatccaaggaagctcaggactcccaggtctgattggacgaaag
ggtcctaagggcaaaaggggagatcccgggcctccaggcgtcctccgggtggcagacatc
acgtacaccggtcgagttggagatcccgggtcacccggcccgcacggccttaatggagac
agaggacggatgggaatacctggcgccccaggactgcctggcagatcaatactcggactg
cggggagttgtaggtcagaagggagttccaggatgcaagggggtcagaggagatccaggt
cagatctctacagagaaacccacacctggagaacctggaaaaccagggcgccctggattc
aggggacctaaaggacagcaaggtgttccaggtacctactgtctccctggagcctcagga
ccacctggggacccaggtgtgtcagggcccacagggtttcagggctcactgggaattaaa
ggtagttgtggtggctgttcttgtggcgttcctcttgtactaagaggtgcacctggccct
atgggtgacttgggatttccagggttccaaggatcccccggacccacaggtcctcgggga
gagtacggtgttcccggagacacaggagagactggtgagcagggtcgggccggattcccg
ggtttcaaaggctttaaaggacagaaaggagatttaacggtggaggatattgaaggtgag
aagggaaacaagggacagcagggccctgcaggcagacaagggttcccaggaagaagagga
cagactgggcccccaggggtccctggaaatcccggtttccagggtgagagtttttccagt
ttccctggagaaaggggcctcagaggaactacagggttaaagggatatttaggacctcca
ggtccccgaggacaaggtgcagatggagctgtgggaaaacatggactccctggggatcca
ggacctactggatcctgtggccccccggggttaaagggggttaaaggtgaccctccaccc
tttagacccataagacctggtggccccggagagaagggagaccttggaagtgcaggctac
gcaggttcccagggtcctccaggttttcctggtggcattgggtcagatgggcctaaagga
gacaatggaaaggatggacttcctggaatacctgggaaacaaggacctcagggtgtcact
ggagattatggagatgaaggacctgaaggcttcagttatgatggagatccaggctctccg
ggacttcgaggctctgcaggtctcaggggaccaacaggagactctgctgttgggctccca
ggctctattggctttccagggacacggggccctcaaggacccaaaggagtgcctggcaac
cctggccaacatggtctaccaggcatcagtggtctccatggatgtcgtggagcaaagggt
cagaaaggagatgatggagccccgggtataactggctgcccaggacccacatcgaaccga
tgtgatccaggaaaacctggtacaatgggccagtcgggctttcgaggatctactggagcc
caaggtatttctggggataaaggggagatcggcaacgttggttctgaaggaattggcccc
aaaggctctgtgggtgcatcaggacttccaggtgtccgtggaaagcctggtggtcagggc
ctcccaggactcagtggaagctcaggacttcagggcactggtggtccaaaaggtctgact
ggaccctggggctgggagggagtgcctgggaaccctggaaagccgggggtccccggagat
ctgggcaggactggagagagagggttcaatggacgagatggtggtcaaggaatcgaaggg
ccaaaaggacagaaaggctttcaaggtccaacaggccctccaggaccaaccaactacatc
ctcattaaaggaaagagaggaaacccaggacatccctccactgttggatttactggacct
cgaggaagcaaaggtatgcagggagcagcaggcaagccagggcatccagggtgcgacgga
cccccgggcattgtaggaccccccgggccccctggaccctgtggcaaacaaggccctgtg
ggacccccaggactgaaggggtttgaaggatactgtggctttcccggaaacgttggagat
ccaggtgacaaaggatgcacagggaaacctggtgagcccggttccccaggatgtaaaggt
cccaaaggtaataaaggggagtctattggttgccctggtccaaatggagaaagggggcct
cgtggagacaagggacacctaggacctcctggatctcctggagatctgggagggttgggt
tttactggggctccaggagagaaaggatgcagaggagagaagggacactgtggaagcatc
ggtcctagaggtgtgattgggcccccaggtcccaggggtcaaccaggtactccaggtatt
caaggtaaatgtgggggtgatggtcctccaggacacgaaggctgccgaggacttaaaggc
cctcctggaccgctgggacttcatggactggacggactgaaaggagagaagggggccatt
gggaccagaggtcggggctttccaggtgtcaaaggttccttgggtccaccaggagataaa
ggccctccaggacatcaaggtctttgcggtacatctcaacctggaccaccaggatacaaa
ggccccttcggacccaaagggcctccaggtaaatgtggacctccaggtaaacctggacca
gactgcaaaactcctatcaaagggccctgtggagatcctggctgtccaggcccagatgga
gagccagggaatcttggtgagataggggatcctggtcaaaaccccccaattcgtggggat
attggggacaatggtaacgtgggatgccaagggccaaagggaccaagaggatgcccagga
catataggaacacaaggttgcaccggatacccaggacaaaaaggtatgagaggcgatact
ggtttgttgggaatacctggccctcgaggttgtaagggtgttcctggtcactgtggatct
ccaggacttcctggacctcctggagttcatggaccaaaaggggaaaagggtgacacctta
gatcctgcactcatatcacctccaaagggtcctcctggagaaactggctcaactggtcaa
tttggacatcctggcctgaatggagaacaaggcccatgtggtcctaaaggtgataaagga
gattatggacctcagggatgtaaaggctgtgatggaccccctggtctaaaaggagacaaa
ggagagccaggcctgccaggagagagtggagtagtgggacagaaaggtaaccgtggtcca
gaaggtgaaaagggttctcacggaccaaccaaagaattgaacttgggcttgttggtggtg
cacagtcaaagtgcaaacactcccaggtgtccaggcaacatgaacaccctgtgggaagga
ttcagtctgctgtatctggaaggccaggagcgggcacacacccaggacttgggtcagccg
gggtcgtgcatgcgtgtcttttccaccttgcccttcgctccatgtaacaagcatacttgc
tcttacgccagtcgtaatgataaatcctattggctaacgacgatggagcctgtcccacgt
gaacacgtgagtggagtcaacatcaaaaagtacatcagccgctgcgtggtgtgtgaagcc
ccatccctacccatcgcagtacacagccagtccagtcagtctgtggagtgtcccgaaaac
tggacagaactgtgggacggatactccttcgtcatgcataccggtgcaggtgatgaaggt
ggcggccagcctctgacatcatcaggtagctgtctgaaagcatacaaggcccagccattc
gtggagtgtcaggggcctcgtggaacctgccacttcttcgccaacatgtacagtttctgg
ctgaccaccctgaccgacccggcgatgctgaccaatgaccaagagcagaggaggagcatt
gcaaagtgcaaagtctgcatgaggctgtga |
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