Oreochromis niloticus (Nile tilapia): 100700822
Help
Entry
100700822 CDS
T06104
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100700822 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100700822 (atrx)
03036 Chromosome and associated proteins [BR:
onl03036
]
100700822 (atrx)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100700822 (atrx)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100700822 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100700822
NCBI-ProteinID:
XP_005467913
Ensembl:
ENSONIG00000017898
LinkDB
All DBs
Position
LG2:26926588..26961171
Genome browser
AA seq
2011 aa
AA seq
DB search
MTTARSKMSLAASESHLDQMAEKEEEPGSSAETMKPSSSRNKRKPTSVAKHTDQNGSESS
AESENEGATSDNPSDSNTGSVSKGTLVMRPAGNENKGAMKLRVDFKQKKTDDTLQKKVNC
TACGKQVNQFQRNSVFVHPVLKVLICKSCYKYYTSDDISRDSDGMDEQCRWCAEGGKLIC
CDYCNNAFCKKCILRNLGRKELSGITDENSKWHCYVCRSEPLQDLVSKCSRIMEKQQRKQ
KKTEKTEERESKKHKNKAAKEHKAVVNGKEHTEDSGTMTFSYKKLHIPKELIKKTKKLVE
TTTGLNNTFIQFIQQEAEDQGEKSIRYRHLKAFKAVLSDLRKAHSALEEALEPEFRNMEL
QNGNEGQHVVRKSTNVEAVAENDTTDNIADLVCESDPPKEVDEETLQEQDVEKDQVSEQS
EINDHQTETDATQRTIKKEVREDGLVSAGEMSLDHDIMSVPPSVPEELFQMVESLADSTM
LSQADTTSVTDAESQSNGTPTDTEQPQPKVKNLIVKLTPVPVVTTCGSRPSRSKNKEKGS
EMPKKSEEECKEEENAAADEVDGTKSPPPSRRSSRVKTTPLRKQTENKDKNVSSDSDSEE
EEDDKDKVKSSKKSRSTKKEAEKQAKASDKKTADSDSDEVPDVLMEKAAEGNSTDEGIAN
SKKRSLKLNPSTEDAEKLSKRKRKSEGSDLDLASKGKKTTKKKKRNGSDSSDSDEEKDSK
AGVARRRSTRVKKQDDTKEESKNSPEPKPKRSYEKKHKGKSSRTSSKLQLTSSDEDEEEE
EAEGDSGEDSDEQKIKPIVEDNVLAGSAAFIQSSGDEVDTKEGITGICDDDDDDPENRIA
KKMLLAQIKSNYSSGAESSSDNEEAEKEEKSSKKVKKENEEDEQQDDEDTEDSGSDVEVK
KSGRRHKLLRHKLSLSEGESGEEKAVGKEKKKGKKKSGRKVDSDDSADSDFEKSESSAGS
AMSEVVSDSDNEDKRRKTRAAKKKDDEKQRSYAQKKKRRRIKVQDSSSSNEKSGEEGEED
QDGEGRKGRKKIRKILKDDKLRTETRDALKEEEERRKRIAEREALREKLREVIVVEESSQ
VVCPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSAGS
GCILAHCMGLGKTLQVVTFLHTLLLCEKLDFTTALVVCPLNTVLNWLNEFEKWQEGMKDE
ESLEVTELATVKRPQERAYALQRWHEMGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTL
VEPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLIEYHCMVNFIKEN
LLGSVKEFRNRFINPIQNGQCADSTLQDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLP
PKHEYVLSVRMTPIQAKLYRYYLEHFTGVGNAVEGGRGRAGTKLFQDFQMLSRIWTHPWC
LQLDYISKENRGFFDEDSMDDFIASETEESSMSLTSEDEKIKKKKKQGKGKKKGSDDSDS
DDVEVIKEWNTSSRGRNGEGRNRAEPVDEPRPSGSAPGSPTADWHKEFVTEADAEILEHS
GKMMLLFEILRMAEEVDDKVLVFSQSLISLDLIEDFLELACRAKDEEKISPYKGEGKWYR
NIDYYRLDGSTNATTRKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASW
NPSYDIQSIFRVYRFGQLKTVYVYRFLAQGTMEEKIYERQVTKQSLSFRVVDQQQIERHF
TMNELAELYTFEPDLLDDPSEKKSKKATPMLPKDPFLAEMLQNNKDQIVCYHEHDSLLDH
KEEEALSEEERKAAWAEYEAEKKGMSMRTNYQTAYAHTDMNNPSYFTYNIGALPSMTNQQ
LEELINQGRQKVIEATNALKSLSRESLEDIISRVWKENPALTENQVQAVALGRQATVELE
LKRREAIYRDVLNRQQSLMMYVQKLITNRKVQEQQLAMANQASYLNQLALQNGMMGAGGL
SQMDLLTLYQQLHGLGGHQGMGKNPGPSKGL
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcgagaagtaaaatgagtctggctgcttcagaatcacacctagaccaaatg
gcagaaaaggaagaggagcctggtagctcagcagaaactatgaagccctcctcttctcgc
aacaagaggaagcccacctctgtagctaagcacacggaccagaatgggtccgagtcctca
gccgaaagtgaaaatgaaggtgccacttctgacaatccttcagacagtaacacagggagt
gtttctaaaggcactttagtgatgaggccagctgggaatgaaaacaaaggtgctatgaag
ctcagagtggatttcaaacagaaaaaaacagatgataccctgcagaagaaggtaaactgc
actgcctgtggaaaacaagtgaaccagttccagcgtaactctgtgtttgttcatcctgtg
ctcaaagtacttatttgcaagtcatgctacaaatactatacaagtgatgatatcagcaga
gactctgatgggatggatgagcagtgcaggtggtgcgctgaaggcggcaaactcatctgc
tgtgactactgcaacaacgccttttgcaagaagtgcattctgcgcaacctgggcaggaag
gagctgtcaggcattactgatgagaactcaaagtggcactgttatgtctgcagatcagag
cccctccaggatctggtctccaaatgcagtcgcatcatggagaaacagcagcgtaagcaa
aagaaaacggagaagacggaggaacgtgagagcaagaagcataagaacaaagcagccaaa
gagcacaaagcagtcgtcaatggaaaagaacacacagaagactcggggaccatgacattc
tcctacaaaaaactgcacataccaaaagaacttataaagaaaacaaaaaagcttgttgaa
actacaactgggttgaacaatactttcatccagttcattcaacaggaagccgaggaccag
ggagaaaaatctatcaggtatcggcatttgaaagccttcaaggccgtgctttctgatttg
agaaaagctcacagtgcgttagaggaggctttggaacctgagtttagaaacatggagttg
cagaatggcaatgaaggccagcacgttgttagaaaaagcactaatgttgaggcagttgca
gaaaatgataccacggacaacattgcagatttggtgtgtgagagcgatccccctaaagag
gtggatgaggagacgcttcaggagcaggatgtggaaaaagatcaggtctcagagcagagt
gaaataaacgatcaccaaacggaaactgacgcaacccaaaggacaattaaaaaagaagtt
cgtgaagatgggctggtgtctgctggtgaaatgtccttagatcacgatattatgtctgtg
ccgccttcggttcctgaagagctttttcagatggtggagagtcttgcagattctacaatg
ctgtcacaggctgacacaacctcggtcaccgatgctgagtcacagtccaatggaacccca
acagacactgagcagccccagcccaaggtaaagaaccttatagtgaaactgactcctgtc
ccagttgttacaacgtgtgggtcaaggccatccaggtccaaaaacaaagaaaagggcagc
gagatgccaaaaaagtctgaagaagaatgcaaggaggaagaaaatgccgctgctgatgaa
gtagatggaaccaagagcccaccacccagccgtcgttctagtagagtgaagaccactcct
ttgagaaagcagactgagaataaggacaagaatgtgtcctctgactcggattcagaggaa
gaggaagatgacaaagacaaggtcaaatcttccaagaaatccaggagcactaaaaaggaa
gccgagaaacaggccaaggcttctgataaaaagacagctgactctgactcggatgaagtt
cctgatgtactgatggaaaaagccgcagaaggcaacagcactgatgagggaatcgccaat
tctaaaaagcgttcactcaaactaaacccatccacagaagacgcagagaaattgtccaaa
cgcaaaagaaagtctgaaggctccgatttggaccttgcaagtaaaggtaagaagactacc
aagaagaagaaacggaacggttcagactcctcagactctgatgaggagaaggacagtaaa
gcgggtgtagcgaggaggagatctacccgtgtaaagaagcaggatgacacaaaagaggaa
agcaaaaactcacctgagccgaagccgaagaggtcctacgaaaagaagcacaagggaaag
agctctagaacatcctcaaagctacagttgacctctagtgatgaggacgaggaggaagag
gaggctgaaggtgactctggggaggacagtgacgagcaaaagatcaaacctattgtggag
gataacgttttggcgggcagtgcagcctttattcaatcctcaggagatgaagtggacact
aaagagggaattacagggatttgtgacgatgatgacgacgatcctgagaacaggattgcg
aagaaaatgcttctcgcccaaataaaatcgaactactcctcgggagcagagagctcctct
gacaatgaagaggcagaaaaggaagagaagtcctccaagaaagttaaaaaagaaaatgaa
gaagatgagcagcaagatgatgaggatacagaagactctggctctgatgtcgaagtgaag
aagagtggcagacgccataaactgcttcgtcataaactctcactgagtgagggtgaatca
ggagaggagaaggctgtcgggaaagagaagaagaagggcaagaagaagtcgggacggaaa
gtggacagcgatgactctgcagactcagactttgaaaagtctgagtccagcgcagggtcg
gccatgagtgaggtggttagcgactcagacaatgaagacaagcgtcgaaagaccagagct
gcgaagaagaaggatgatgaaaaacagagaagttacgctcagaagaagaagcgacgcagg
atcaaagttcaggattcctcttcaagcaatgagaagagtggagaggagggcgaggaggac
caagatggagaaggacgcaaaggccgaaagaagatccgcaaaatcctgaaggatgacaag
ctgcggacggagacgagggatgctctgaaagaagaggaggagaggaggaagcgcatagct
gagagagaggcactcagggagaaacttcgagaggtgattgtggtggaggagtcttcccag
gttgtctgccccatcactaccaagctggtgctggatgaggacgaagaaaccaaagagcct
atggtgcaggtgcacaggaacctggtgacaaagctcaaacctcaccaggttgatggagtg
cagtttatgtgggactgctgctgtgaatcggtgaaaaaaattgagaagtctgctggctct
ggctgcatccttgcccactgtatgggcctgggaaagactctgcaagtggtgacatttctt
cacacgttgctgctttgtgagaagctcgatttcaccacagcactggtggtttgccccctg
aacactgtcctgaactggctcaatgaatttgaaaagtggcaagaaggaatgaaggatgaa
gagagtttagaggtaactgagctggccacagtgaagaggccacaggagcgagcgtacgcc
cttcagcgatggcatgagatgggcggcgttatgatcatgggctacgaaatgtaccgaaac
ctgacgcagggcaggaacatcaagagcaagaagctcaaagagacttttcagaagactctg
gtagagccagggccagacttggtgatctgtgatgaaggccacatcttgaagaatgaggcc
tctgctgtgtccaaagcaatgaactctatcaggacgaggaggaggattgtgctgactgga
acgccgctgcaaaataaccttattgaataccactgcatggtgaacttcattaaggaaaac
ctgcttggttcagttaaggagtttaggaaccgctttattaaccccatccagaacggtcag
tgtgccgactccaccctacaagatgtccgggtcatgaagaagagagctcacattctttat
gagatgcttgctggttgcgtccagagaaaagattacactgcactcaccaagttcctacct
cccaagcacgagtatgtgttgtcagtcagaatgactccaatccaggctaaactttacaga
tactacctggagcacttcacaggtgtggggaatgctgtggaggggggcaggggccgagcg
gggaccaaactcttccaggatttccagatgctcagcagaatctggacccatccctggtgc
cttcagctggactacatcagtaaagaaaacaggggtttctttgacgaggacagcatggac
gacttcatcgcgtcagaaacagaagaatcctccatgagtctgacctctgaagatgagaag
atcaaaaagaaaaagaagcagggaaaagggaaaaagaagggatctgacgattcggacagt
gatgatgttgaggtcatcaaagagtggaacaccagctctcgtggcaggaacggcgagggc
cgaaacagagcagagcctgtagatgaaccacggccctctggctccgcaccaggaagtccc
actgctgactggcacaaggagtttgtcacggaggctgacgctgagatcctggagcactca
gggaagatgatgctgctttttgagatcctgcgcatggctgaggaagtagacgacaaagtg
ttggtgttcagtcagtctctcatctctctggatctgattgaggatttcttagagttggct
tgcagagctaaagatgaagagaaaatttctccatacaaaggtgaaggcaagtggtacagg
aacattgactactatcgtctggatggctctaccaatgccaccaccaggaagaagtgggct
gaggagtttaatgacaccagtaacacaagaggtcgtttgtttctcatttctacaagagct
ggttcacttggcatcaacctggtggcagcaaatcgggtcatcatcttcgacgcctcctgg
aatccatcctacgacatccagagtatcttcagggtttaccgctttgggcagcttaagact
gtctacgtctacaggttccttgcccagggcacaatggaggagaagatttatgagcggcag
gtaaccaaacagtctctgtcattccgggttgtggaccagcagcagattgagaggcacttt
acaatgaacgagctggccgaactctacacctttgagccggacttgctggatgatccctct
gaaaagaagagcaagaaagccacacccatgcttcctaaggatcccttcctggctgagatg
ctgcagaacaataaggaccagattgtgtgttaccatgagcacgactccctgctggaccac
aaggaggaggaagccttgagcgaggaggaacgcaaggctgcttgggctgaatatgaagca
gagaaaaagggtatgtccatgaggaccaactaccagacggcatacgctcacacagacatg
aacaaccccagctacttcacctacaacattggagctttgccctccatgaccaaccagcag
ctggaggaactaataaaccagggccgacagaaagtcatcgaagctacaaatgctttgaag
tctttatcacgggagtcactggaagatataatcagtagagtgtggaaagagaacccagcg
cttacagagaaccaggtccaggctgtcgctctggggcgacaggccaccgtggagctggag
cttaaacgcagggaagcgatctacagggatgtcctcaacaggcagcagtcgttgatgatg
tacgtgcagaagctgattaccaacaggaaggtgcaggagcagcagctggcaatggccaat
caggccagctacctaaaccagctggccctgcagaacggcatgatgggagccggcgggctc
agtcagatggacctgctcactctttaccagcagctccacggcctgggcggccatcagggt
atgggcaaaaatcctggcccctccaagggcctgtag
DBGET
integrated database retrieval system
