Oreochromis niloticus (Nile tilapia): 100700915
Help
Entry
100700915 CDS
T06104
Symbol
lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100700915 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
onl04030
]
100700915 (lgr5)
G protein-coupled receptors [BR:
onl04030
]
Rhodopsin family
Others
R-spondin
100700915 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_1
LRR_9
7tm_1
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_R13L1-DRL21
EpCAM_N
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
100700915
NCBI-ProteinID:
XP_003448186
Ensembl:
ENSONIG00000018057
UniProt:
I3KNQ8
LinkDB
All DBs
Position
LG17:complement(20219217..20262195)
Genome browser
AA seq
939 aa
AA seq
DB search
MLGFVPVLAAFALLSAGFRSAGAELEMRSSAVPAVQRAAAGMNSSGDEVGGAGRTSCPGR
CRCEVDGLLHWVDCSDLGLREIPSNLSVFTSYLDLSMNNLTVLSSGALSNLHFLEELRLA
GNELTFIPRGAFTGLYNLKVLMLQNNQLRSVPAEAFNNLRNLQSLRLDANHISSVPAGCF
SGLRSLRHLWLDDNSLREVPVEALGKLPALQAMTLALNHISHIPDHAFSKLGRLVVLHLN
NNRIVSMGPNCFHGLHSLETLDLNYNSLMEFPTAIRSLSHLKELGFHSNNIQSIPEHAFT
GNPLLNTIFFYDNPIHSVGRSAFQNLPELRMLSLNGAADLTEFPDLTGTKSLESLTVTGA
RITSLPGSVCEQLPNLQLLDLSYNQIQTLPSFSGCESIRKIDLHHNVVEKLEENTFAGLL
SLRSLDLSWNRLSSVKPNSFSALPALTKLDLSSNQLSSLPLSGLQSLTHLRLAGNEQLTE
LIAQEDLPRVRVMELPYAFQCCAFISCERRGGGAGGLSWEREEARDSAGRDAAILSSQVD
QDWEDFLMELEDEPKPQHSVHCSPAPGPFRPCLHLLGSWMIRGGVWLIAAISLVSNSLVV
LSVFFSPATSLTPPKLLIGLLALVNGLMGVWSGWLAAVDAWTFGSFWRYGAKWESSFLCR
LSGFLCVFASQTSLFLLTVAALERCVATTVGHSKTASNSGHSSSPLSFRVSICLCFLLGF
TVTMPSLVAGHSSTSLCLPLPSSSSSSSLAFSVSLVLFDSLCFLLMTFSYTHLYCRAHKA
PPSSEEEAALTRHVAWLLFSDCLLYLPVAFLTFSSLLRLPAAGPEAAKGVLLLVAPLPAC
VNPLLYLLFNPLAREELAALAKRTCKGVALLELRRPRRGGGGAGGLSPCTLDLAYDEDAE
KQSCDSTQVLVLVGGVKEEDEEVGQGRAKSGAQHLATLQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgctagggtttgtgcctgtcctggccgcctttgcgctgctctcggcgggcttcaggagt
gccggggctgagctggagatgcggagctccgccgtgcccgcggtgcagagagctgcagct
gggatgaacagctccggggacgaggtcgggggagcggggcggaccagctgccctggccgc
tgccggtgtgaggtggacgggcttctgcactgggtggactgttcggacctgggcctccgg
gagataccgagcaacctgagcgtcttcacatcttaccttgatctcagtatgaataatctg
actgtgttatccagcggagctctgtccaacctgcacttcctggaggagctgcgtttggcg
ggaaatgagctgaccttcatccccagaggagcgttcaccggcctctacaacctcaaagtg
ctgatgcttcaaaacaaccagttgagatctgttcctgctgaagccttcaacaacctgcgc
aacctgcagtcactgcgtctggacgccaatcatatctctagtgttcccgctggctgtttc
tccggcctgcgttcactacgtcacctctggctggatgataactctctgagggaggtccca
gtggaggctctgggcaagctccccgccctgcaggccatgacacttgctctcaaccacatc
agccacatccctgaccatgccttcagcaagctgggccgcctggtggtgctgcatctcaac
aacaataggatcgtttccatgggaccgaactgcttccacggactccacagtttggagacg
ctagatttgaactacaacagcctgatggagtttcccacagccatccgctcactcagccac
ctcaaggagctcggattccatagcaacaacatccagtctatcccggagcatgccttcact
gggaaccctttactgaacaccatatttttctatgacaacccaattcactctgtcggacgc
tcggccttccagaacctaccagagcttcgcatgctatctctgaatggagctgcagatctc
actgagtttccagatctgacgggaaccaaaagcctggagagcctgactgtcaccggagct
cgaatcacctcattgcccggttcagtttgtgagcagcttccaaacctgcagctgctcgat
ctctcctataatcaaatccagactcttcccagcttctccggctgtgagagcattcgaaaa
attgatctgcatcacaatgtggtagaaaaactggaggaaaacacattcgctggtctgcta
tcactacgctcacttgatttgtcctggaatcgactgtcatcggtgaagccaaactcgttc
tctgctctccctgctctcaccaaacttgacttgtcatccaatcagctttcttctctgcct
ctgagtggcctgcagagtttgactcacctgcgtctggctggaaacgagcagctgacggaa
ctaatagcccaagaggatctgcctcgagtcagggtgatggagcttccctacgccttccag
tgctgtgccttcatctcctgtgagcggagaggcggaggcgcaggaggcttgtcctgggag
agagaggaagcaagagactcagctggaagagatgcagctatcctttccagccaagtagat
caagattgggaagatttcctgatggagttggaagatgagcccaaaccccaacactcagtc
cactgcagcccggcaccaggaccgttccgtccctgcctccacctgctcggcagctggatg
attcgtggtggggtttggcttatcgcagcaatctcattggtcagcaacagtcttgtcgtc
ctttcagtcttcttttctccggccacttctctcactccccccaaactactgattggctta
cttgccctggtgaatgggctgatgggagtgtggagcggctggttggcggcagtggacgct
tggacattcgggagcttctggaggtacggggcaaagtgggagagcagcttcctgtgtcga
ctcagtgggttcctttgtgtgtttgcgtcacagaccagcctcttcctccttaccgttgca
gctctagagcgatgcgtggccaccactgtaggacacagcaaaactgctagcaacagtggt
cactcttcatcgccgttatccttccgtgtttccatctgtctgtgtttcctgttgggcttc
accgtcacaatgccctccctggtggccggacacagcagcacctctctctgtttaccacta
ccttcctcatcatcatcgtcgtccctagccttctccgtgtctctggtgctcttcgactcc
ctctgcttccttctcatgacgttctcctacactcatctctactgtcgcgcccacaaggct
ccacccagctcagaggaggaagcggcattgacgcgacatgtggcctggctgctcttctct
gactgcctcctctacctccctgttgccttccttacgttctcctccctcctgcgcctccca
gccgctggaccagaggcagcgaagggggttctgctgcttgtcgccccactgccagcctgt
gttaaccctctgctgtacctcctcttcaacccgctcgccagggaggaactggcagcactg
gccaaacgcacctgcaagggcgtggcactactggagctacgcaggccgagaagaggagga
ggcggagctggaggtctgagtccatgcacactggatttagcgtatgacgaggatgcagag
aaacagtcatgtgactcgacgcaggtgctggtacttgtcggaggtgtcaaagaagaagac
gaggaagtggggcaaggaagggcaaagagtggcgcacaacatttagcgacacttcaataa
DBGET
integrated database retrieval system
