Oreochromis niloticus (Nile tilapia): 100700925
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Entry
100700925 CDS
T06104
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100700925
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100700925
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100700925
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100700925
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100700925
NCBI-ProteinID:
XP_003451004
Ensembl:
ENSONIG00000006222
UniProt:
A0A669F1W4
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Position
LG11:20595130..20615827
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AA seq
503 aa
AA seq
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MEYEEPDVPSADTPIKRGGAVSKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQLQGDAQTVLSYPNKNRQDRSPQLLQPMAPTYPYSGDAELLTYAADVHP
YLMCSPNDSQVPAMIYRTSGISPTSRSQGRGDNAGHADIRGFDSRQSSHDMMGIHPYSGL
EDPYSLYPHSLRNIDELCASIVRSHRETSQYRVEELQALRWKLFSREEIQTYQSKSVDEM
WQHCAIRLTDAVQFVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMSRFFNTENNTV
FFDGKFAGTEVFKSLACGDLIAAVFDFAHGMCALKLTEQQIALFSALVLINADRPCLEDR
GKVQRVQRSVELGLTHILHRDNQESLMHKLYQRMAVLRSLCSLHMEKLRWFSQRYPLTAH
SLFPPLYKELFASEAELLPGTTH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaagagcccgacgtgccctccgctgacacccccatcaagagaggaggtgcc
gtgtccaagaagagtcatttgacccagattgaagttatcccatgtaaaatctgtggagat
aagtcctctggagttcattatggagtcatcacttgtgagggctgcaagggatttttccgg
cgcagccaactgcctaccgtatcttactcctgctccaggcaaagtaactgccagatcgac
cgggccagccgcaaccgctgccagcactgccgtctgcagaaatgcctggcacagggcatg
agcagagatgcggtgaagtttggacggatgtccaagcgtcagcgcgactctctgatcgct
gaagtggaaaggcaccgacagcagcagcaacagcagcttcagggagacgcccagaccgtg
ttgtcctaccccaacaagaaccgccaggaccgctccccccagcttcttcagcccatggcc
ccgacctacccatacagcggagatgccgagctgttgacctacgccgctgatgttcaccct
tatctgatgtgctccccgaacgactcacaggtgcctgctatgatctaccgcacctctggg
atctctcccacctcaagatcccaagggaggggagacaacgccggtcatgctgatataaga
ggatttgactccaggcagtcgtctcacgatatgatggggattcatccttatagtggtctc
gaggatccatacagcctgtatcctcactccctgcgaaacatagatgaactgtgtgccagc
attgtgcgttcccacagagagaccagtcagtacagagtggaagagctccaagctctcagg
tggaaactcttcagcagagaggagatccaaacctaccagagcaaatcagtggatgagatg
tggcagcactgtgctatccgacttactgatgccgtccagttcgtggtggagtttgcaaaa
cacatcccaggtttccgtatgctgagccagaacgaccagatcgcccttttaaagactggc
tccatggaggtggttctggtcagaatgagccggttctttaacacagagaacaacactgtg
ttctttgatgggaagtttgctggaactgaggtcttcaaatctttggcttgtggtgattta
atcgcagcagtatttgacttcgcacatggcatgtgtgccctaaagctgactgagcaacag
attgctctcttcagtgccctggtgctcatcaacgcagatcgtccgtgtctggaggacagg
ggcaaagttcagcgagtacaaagaagcgtggagttgggactgacacacattctgcaccga
gacaatcaagaaagtttgatgcacaagctgtaccagaggatggcggtgttgcgctcgctg
tgcagtctgcacatggagaagcttcgctggtttagtcagcggtacccgctcacagctcac
tctctgtttcctccgctctacaaggagctgttcgcatcagaggcagagctcctgccgggg
accactcactga
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