Oreochromis niloticus (Nile tilapia): 100701063
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Entry
100701063 CDS
T06104
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100701063 (ddx27)
03009 Ribosome biogenesis [BR:
onl03009
]
100701063 (ddx27)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100701063 (ddx27)
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100701063 (ddx27)
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
Pre-60S particles
Helicases
100701063 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
Cas3-like_C_2
Zip
Motif
Other DBs
NCBI-GeneID:
100701063
NCBI-ProteinID:
XP_005465407
Ensembl:
ENSONIG00000019473
UniProt:
I3KTR8
LinkDB
All DBs
Position
LG5:complement(128364..136905)
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AA seq
758 aa
AA seq
DB search
MLEQLGLIGTIRDEDSSPDEAETESEQEEEPIVLKKKKKSRGSRDFNCDFEFGERDGPSH
DDDWAMADVMKQLKKKRTLTTLDQKIEKIRRKRKAEEKSSQSDAAEASSENHQEEEEEDV
KPPAGEVAATDEDDDEDENEEFGSSDEEILTKSDTLRDKERRGKKRKVAEEAAESFYEDA
SQYDDQLTFDDMNLSRPILKAITALGFKQPTPIQKACVPVGLLGKDLCACAATGTGKTAA
FMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKS
QEAALRAGPDILIATPGRLIDHLHNTPSFELTHIEILILDEADRMLDEYFEEQMKEIIRL
CSYNRQTMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFVRIRPHREGDRE
AVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKD
EQIDILVATDVAARGLDIDGVKTVINFTMPGTVKHYVHRVGRTARAGRSGRSVSLVGESE
RKMLKEVVKSAKSTVKARILPPEVILKFRDLISKLEKDVEAVMKLEREERELAASEAKLS
VAQKRLTDSASSDQSQRVWFQTQQERKQSRMSKALQEFDLAIRGKKKREKFLKDGRKKEL
TSEERAQFEILKAQMFAERAAKRERRPKRARAMPEDEAPTKAANQKAGKGGKKSVFDKEL
TNTSSKALKQYRAGPSFADRKRLGVDRKRPGTSRFRRK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcagctcggtctgatcgggacgatccgggacgaggattcgagtcccgacgag
gcggagaccgaatccgagcaagaggaggagccgatcgtgctgaagaagaagaagaagagt
cgcgggtcgagagattttaactgtgactttgagtttggagagagagacgggccgagccac
gacgatgactgggcgatggccgatgtcatgaagcagctcaagaagaagagaaccttgaca
actctggaccagaaaatagagaaaatccgccgaaagaggaaagctgaggagaaatcatct
cagagtgacgctgctgaagcttcatcagaaaaccaccaggaggaggaggaggaggatgtg
aaacctccagctggagaggtagctgctactgatgaagacgatgatgaggacgaaaatgag
gagtttggatcgagcgacgaggaaattttgaccaaatcagacacgctcagagacaaggaa
cgacgggggaagaagaggaaggtggcagaggaggcagcagagtcgttctatgaagacgcg
tcgcagtacgatgaccaactgactttcgacgacatgaatctgtccaggccgattttgaag
gccatcactgctctgggctttaagcagcccactccgatccagaaggcctgcgtccctgtc
ggtctgctgggcaaagacctctgtgcctgtgctgctactgggacagggaagacagcagcc
ttcatgttgcctgtgctggagcgattggtttataagcccaggacatcccaggtgacccgc
gtcttggttctggttcccaccagagagctggggatccaggttcactctgttgcccgtcaa
ctcgcccagttcacgtctatcaccacctgcctggctgttggtgggttggacttgaagtct
caggaggcagcgttgcgggctggcccggacatcctaatagcgacacctggtcggctgatc
gatcaccttcacaacacgccgagctttgagctgacgcacattgagatcctgatcctggac
gaggccgacaggatgctcgatgaatacttcgaggagcagatgaaagagatcatcaggttg
tgttcctacaacagacagaccatgctgttctctgcgaccatgacagaggaggtgaaagac
ttggcagcggtgtcattgaagcagccagtcaggatctttgttaacagcaacactgacgtg
gcgccgttcctgcggcaggagtttgtccgaatccgacctcacagagaaggagatcgtgag
gccgtggtggctgctctgctgactcggacgttccaggatcacgtcatgttgttcactcag
acgcggaaacaggcccacagactgcatatcttgttgggactaatgggattgaaggttgga
gaactgcatggagaactgagtcagaaccaacgactagagaacctcaggcgtttcaaagat
gaacagattgatatcttggtggcgacagatgtggcagccagaggtttggacatcgatgga
gtcaaaacagtgataaacttcaccatgcctggcacggtgaagcattacgtgcaccgcgtg
gggcggactgcgagagcggggcgatcggggcgttcagtgtctctcgtcggagagtccgag
aggaagatgctgaaagaggtcgtgaagtcagccaagagcaccgtgaaggctcgcattctg
ccgccagaagtcatcctgaaatttagagacctgatctccaaactggagaaagacgtggaa
gctgtgatgaagctggagagagaggaacgagagctggctgcgtctgaggccaagctgagt
gtggctcagaagcgtctcactgactccgcctcctctgatcagtcacagcgggtttggttt
cagacccaacaggaaaggaaacagagccgcatgtcaaaggccctgcaggagttcgatctt
gccattagagggaagaagaagagagagaagttcctgaaggacggcaggaaaaaggagctg
acgtctgaggaacgtgctcagtttgagattttgaaggcccagatgtttgctgagcgagca
gccaaaagagagcgccgaccgaagagggcgagggcgatgccagaggatgaagcgccaact
aaagcagccaatcagaaagcaggaaaaggaggcaagaagtcggtgtttgacaaagagctg
acaaacaccagcagtaaggccctgaagcagtaccgagcaggaccgtcctttgcagacagg
aagcgtctgggtgtggataggaagcgacctggcacttccaggttcaggaggaagtga
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