Oreochromis niloticus (Nile tilapia): 100701082
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Entry
100701082 CDS
T06104
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100701082
03041 Spliceosome [BR:
onl03041
]
100701082
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100701082
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100701082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100701082
NCBI-ProteinID:
XP_003442936
Ensembl:
ENSONIG00000000899
LinkDB
All DBs
Position
LG19:complement(19466517..19481211)
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AA seq
575 aa
AA seq
DB search
MDGRLDADLYPLGSGYVPEIDSVHDISAGTKRGSDELFSSCISNGPYIMNSANGNDSKKF
KGDVRSPGVPSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLELNSEECA
QTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGSVAI
SADAGSMAGAAAAQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALI
QYADAMTAQHAKMSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQ
PSIDHQAMAAAFAAPGIISASPYGGAHAFPPTFAIQQAGLSVPGIPSALASLGMGPTGMA
AAAAAASRLGLSGLSAAGGHNVLLVSNLNPESVTPHCLFILFGVYGDVMRVKILFNKKEN
ALIQMSDGTQAQLAMSHLNGQRLHGRAMRVTLSKHTTVQLPREGHEDQGLTKDFSNSPLH
RFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLRRLFASSGATVKAFKFFQKDRKMALI
QMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgctgacttgtaccctctgggatccggctacgtccctgaaatt
gacagtgtccatgacatatcagctggcacaaagaggggatccgacgaactcttttcttcc
tgcatatccaacggaccctatatcatgaactcagccaatggcaacgacagcaaaaaattc
aaaggtgacgtccgcagtcctggtgttccatcacgtgtggtccatgtacgcaagctgccc
aacgacataaatgaggctgaagttattggcctagggctgccctttgggaaggtcactaat
ctgctgatgctgaaagggaaaaaccaggcattcttggaactgaacagcgaggagtgtgca
cagacgatggtgagctactactcctctgttacccctgtcatcagaaaccaccccatttac
atgcagtactcgacccacaaagagctcaagacggacaactccccaaaccaagtgcgtgcc
caggcagctctgcaggcagttaatgcccttcatggaggaggaatgggaagtgtggccatt
tctgctgatgctggtagcatggctggagcagcggcagcccaaagccctgtgctcagggtc
atagtggaaaacctcttctatcctgttaccctggatgtactccaccagattttctctaaa
tttggtacagtgctgaagatcatcacttttaccaagaacaaccagttccaggctctcatc
cagtatgctgatgccatgacagcgcagcatgccaagatgtctctggatgggcaaaacatc
tacaatgcttgctgtactctgagaatcagcttctccaagcttaccagcctcaacgtcaag
tacaacaacgacaagagcagggactacacccgaccagaccttccgactgcagattcacag
ccctccattgaccaccaggccatggcagctgcgtttgctgcaccaggtataatctcagcc
tctccctatggtggcgctcatgccttccccccaacctttgctattcagcaggcaggtctc
tcagtacccggtattcctagtgccttggcgtccctcggtatgggccccactggcatggcg
gcggcagcagcggccgctagccggctcggcctgtcagggctttctgccgctgggggccac
aatgtcttgttggtcagcaatctgaaccctgagagcgttacgccacactgcctctttatt
cttttcggtgtgtatggcgatgtgatgagagtgaagatcctgttcaataaaaaggagaat
gctctaatccagatgtctgatggcacacaggctcaactagctatgagccacctgaatggc
cagcgtcttcatggcagggccatgcgtgtgacgttgtcaaaacacacaaccgtgcagctt
cccagagaaggccacgaggaccagggcctcacaaaggatttcagcaactctccactgcac
cgttttaagaagcctggctccaaaaactactccaacattttcccaccctctgcaacactc
cacctctccaacataccgccttctgtggtggaggatgatctcaggaggctatttgccagc
tcaggagcaacagtcaaggccttcaagttctttcaaaaagatcgcaagatggctctgatt
cagatgggctcagtcgaggaggcaatagagtccctcatcgagttccacaaccacgatctg
ggggaaaaccaccatcttcgagtgtccttctccaagtccaccatctga
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