Oreochromis niloticus (Nile tilapia): 100701488
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Entry
100701488 CDS
T06104
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
onl03009
]
100701488 (ddx54)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100701488 (ddx54)
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
Pre-60S particles
Helicases
100701488 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
100701488
NCBI-ProteinID:
XP_019216623
Ensembl:
ENSONIG00000038587
LinkDB
All DBs
Position
LG7:complement(21207280..21219659)
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AA seq
817 aa
AA seq
DB search
MAQRKKKLTKKKRHTANREPETDSDGDFELAVEIKNDDSPGRKLPRFPAASECLSDVEPD
TRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKIPTPIQRKTVPVILDGKDVVAMA
RTGSGKTAAFLIPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTALI
LGGDRMEDQFAALHENPDIIIGTPGRLMHVVMEMNLKLHSVAYVVFDEADRLFEMGFAEQ
LQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLRV
DDKPALLLHLLRNVVKPQEQTVVFAATKHHVEYLKELLSSEGLECAYIYSALDQTARKIN
IGKFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAYS
LICPDEMPYVYDLHLFLGRPVQFASPEHTQDSEGVFGRVPQRILDDESAHLITSHENSLD
LQNLLRVSENAYKQYLKSRPNPSPESIRRVKNIDLSSMGVHPVLGCGLEKMELECLQIVD
AIKSYKSKATIFEINSSSKTPASEVMRAKRSKDTRLVDKFSKQREDRAAESRLQQPINPT
TTADCDITEKEESDLNGVFSEVVGGKRRGQQEDGEERPKTKKKRQSGKDEEYYIPYRPKD
FDSERGLSLGGEGSAFEQQASSAVLDLMGDEGDRLNQQKKMMKWDRKKKRFVRETGKEDQ
KKKIKTDSGQVISNKKNRKNFYEEWKKKYKIDDTGSGSDGETGGGGRKPARGRGRGRRGP
NVQSSGDHKARSELKTKDQIMKQRKKKQKHQFLQGGG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagaaagaagaagctgacgaagaagaagagacacacagccaacagagagccg
gagacggactctgacggagactttgagctggctgttgaaattaaaaacgatgattcgcct
gggcggaaactgccacggttccccgcagcatcagagtgcttgtcagatgtggagccagac
accagggagctggtcagagctcaaaacaagaagaaaaagaaatctggagggtttcagtcc
atgggtctcagttaccctgtttttaaaggcgtcatgaagaagggttacaaaattcctact
cccatccaaagaaagactgtacctgtaattttggatggaaaagatgttgtagccatggct
cggactggcagtggtaagactgctgccttcctgattcccatgtttgagaagctgaaggcc
cctcaggcccaaacaggagccagggccctcattctgacccccaccagggagttggcccta
cagaccatgaagttcacgaaagagctgggaaaattcaccggtctcaagactgctttgatc
cttggtggagacaggatggaagatcagtttgctgctcttcatgaaaaccctgacataatc
atcggtacccctggtcgtcttatgcacgttgtcatggagatgaacctgaagttgcacagt
gtggcgtatgtggtgtttgacgaggctgacaggttgttcgaaatgggttttgctgagcag
cttcaggagatcatccgcagacttccagacaccagacagactctgctgttttctgccacc
ctgcctaaactgttggtggagtttgccagagctggcctgacagaacctgtactgattcgt
ttggatgtggattctaagctcagtgatcagatcaagctgtcattcttccacctgcgtgtg
gatgacaagccggctctgctgctccacctcctgaggaacgtagtgaagcctcaggaacag
acagtggtctttgctgccaccaaacaccatgtggagtacctaaaggagctgctgtcgtca
gaaggtttagagtgtgcctacatctacagtgcccttgatcagactgccaggaagatcaac
attgggaaatttgtgcaccggaaagccatggtgcttctggtgactgatgttgctgctcgt
ggtatagacatccccctgctggataatgtcatcaattacaacttcccctccaaggccaaa
ctcttcttgcacagagttgggcgtgtgggacgagcgggccgaagtggcacagcctatagt
ctgatttgtcctgatgaaatgccttatgtctatgacctccacctcttcctagggcgacca
gttcagtttgcttcgcctgaacacacacaagattcagaaggtgtgtttggtcgagtccct
cagaggatcttggatgatgaaagtgctcatctgatcacgtctcacgaaaactcgctggac
ctgcaaaatctgctccgtgtctcagagaacgcctacaagcagtacctcaagtcgcggcca
aacccctcgccggagtccatcagacgggttaaaaacatagatctgtccagcatgggtgtc
catccagtactcgggtgtggtctggaaaaaatggaactggagtgccttcaaatagtcgat
gccatcaagagctacaaatccaaagcgaccatcttcgaaatcaactccagtagtaagaca
ccagccagtgaggtgatgcgggccaaacgctctaaagacactcggctagtggacaaattc
agcaagcagagagaggaccgagctgcagaaagcaggctgcagcagccaatcaaccccacc
actactgctgactgtgacatcacagaaaaggaggagagtgatctaaatggggtgttttca
gaggtggtaggtggtaaaagaagaggtcagcaggaagatggtgaagaacgaccaaagacc
aagaaaaaaaggcagtcaggcaaagatgaagagtattatatcccttacagacctaaagac
tttgactctgagagagggttgagtctcggtggagagggcagtgcttttgaacagcaggcc
tcttcagctgtccttgatctcatgggagatgaaggcgatcgccttaaccagcagaaaaaa
atgatgaaatgggaccgtaagaagaagcgttttgtgagagaaacgggaaaagaagaccag
aagaagaagatcaaaacagacagcggtcaggttatcagtaacaagaagaacaggaagaac
ttttatgaggagtggaagaaaaaatacaagattgatgatacaggatctggatcagacgga
gaaacaggcggaggaggcaggaagccagcaagaggtcgtggccgtggccgacgaggtcca
aacgtacagagctccggtgaccacaaagcacgctcggagctgaaaacaaaggatcagatc
atgaagcagcgcaagaaaaagcagaagcaccagttcctgcagggcgggggatga
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