KEGG   Oreochromis niloticus (Nile tilapia): 100701641
Entry
100701641         CDS       T06104                                 
Symbol
rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A
  KO
K10839  UV excision repair protein RAD23
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03420  Nucleotide excision repair
onl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100701641 (rad23a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100701641 (rad23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:onl03051]
    100701641 (rad23a)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100701641 (rad23a)
Proteasome [BR:onl03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    100701641 (rad23a)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      100701641 (rad23a)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD Rad60-SLD_2 UBA_3 Crinkler Dsc3_N Ubiquitin_2 OTU1_UBXL
Other DBs
NCBI-GeneID: 100701641
NCBI-ProteinID: XP_003446521
Ensembl: ENSONIG00000006571
UniProt: I3JHE7
LinkDB
Position
LG4:7069501..7080407
AA seq 365 aa
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPAAAASPSVSEAPKPPVQDSGSTSTAAPTTNPTPAPAPAPAA
VPIPSGEAKEESSAVATEPQQPASSSGGSQGLDASSTLVTGAEYEAMLTEIMSMGYERER
VVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPTSGTTEAPSVPEGENPLAFLRT
QPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGDAPEV
GEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQ
GLEDD
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcagatcacacttaaaacgctgcagcagcagactattcagattgagatagaccccgaa
caaacggtgaaggccttgaaagagaagatagaagcagaaaggggaaaagacaactttcct
gtatccgggcagaagctgatatatgctgggaaaattttgcaagatgacacaccaattaag
gactacaaaattgatgagaagaactttgttgtagtgatggtgtccaaggctaagcctgca
gctgcagcctcaccatcagtctcagaagcacccaaacccccagtacaggactctggctcc
acatcaacagctgccccgactacaaacccaactccagccccagccccagcccctgcagct
gtccccattcctagcggggaggccaaagaggagtcaagtgccgtagccacagaaccacaa
caaccagctagctccagtggtggaagtcagggcctggatgcatcctcgacgctggtgact
ggagcggagtatgaggcgatgctgacggagatcatgtctatgggctatgaaagggagaga
gttgtggctgcgctacgggccagtttcaacaacccccacagagctgtggagtaccttctt
actggtatccctagcagcccagtccaggagagtaatcccccagcgcaggctcccacatct
ggaaccacagaagctccgtctgtaccagaaggagagaacccacttgcattcctgcgcact
cagccccagttcctgcacatgagacaggccatccagcagaaccctgctctgcttcccgct
ctcctccagcagctaggccgggagaatcctcagcttctacagcaaatcagtcagcatcag
gagctgtttatccagatgttgaatgaaccagtgggagaggggggagatgcaccagaggtt
ggagagatgggggcagcaggggaggaaggcgcgcccgtcaactacatccaggttacacct
caggagaaggaagccattgaaaggttaaaagcgttgggtttccctgaggctctggtgatt
caggcctatttcgcctgcgagaagaacgagaacctggcggccaactttctcctcaaccag
gggctggaagacgactga

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