Oreochromis niloticus (Nile tilapia): 100701663
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Entry
100701663 CDS
T06104
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100701663 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100701663 (usp39)
Spliceosome [BR:
onl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100701663 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100701663
NCBI-ProteinID:
XP_003451756
Ensembl:
ENSONIG00000013330
UniProt:
I3K6L7
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All DBs
Position
LG12:complement(19020549..19026289)
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AA seq
501 aa
AA seq
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MVSLKREREVDLDDDDDNEDGVAAKVGRGHAVEDRRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSN
VPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGYMRIFSKKLPHPDLP
PEEKEALLTTDEYQEQMSESSFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGST
EKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTE
EAQATEKNTTYDLIANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSE
AYIQIWKRQESNDGRNNHTGI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtttctttgaagcgagaaagagaggtggatttagatgatgatgatgacaatgaagac
ggagtggcagcaaaagttggacgaggacatgcagtagaagaccgaagaagccgccactgt
ccttaccttgacaccataaacaggagtgtgctggacttcgactttgagaaactgtgctcc
atctctctctcccacatcaatgtctacgcctgccttatatgtgggaaatactttcaagga
agaggtctgaagtcccacgcttacactcacagcgtacagtttacccatcatgtgttcctc
aatctgcacacactcaagttttactgtctgccagataactatgagatcatcgattcatca
ctagaagatatcacatacgtgctgaagccaactttcaccaagcagcacattgcagggctg
gacaagcagggtaaactgtacagagcctatgacggtaccacctacttaccgggcattgta
gggctcaacaacatcaaagccaatgactatgccaatgtggtgttacaggctttttctaat
gttccacctttgcgaaattacttcctggaggaggaaaactacagaggaatccgcaggccc
ccaggagacatcatgtttctcttggtgcagaggtttggtgagctgatgcgcaaactctgg
aatccaagaaactttaaggcccatgtgtcaccccacgagatgttgcaggctgtagtgttg
tgcagcaaaaagaacttccagattacaaagcaaggtgatgctgtggacttcatgacgtgg
ttcttaaatgccctgcatggtgctcttggaggcacaaagaagaagccatcaatcattaca
aaagcatttcaaggctacatgcggatcttctccaaaaaactcccacaccctgatttgcca
ccagaagaaaaagaggctctgcttacaacagatgagtatcaggagcagatgtctgagtct
tcctttctctttctgacccttgacctcccaactgctccattgtacaaggatgaaaaagag
cagcttataatccctcaggtccctctcttcaacatcctggccaagttcaatggcagcaca
gagaaggagtacaaaacctacaaagagaattttctcaaaaggttccagttgaccaaactg
cctccgtacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaag
aaccccacaattgtcaacttccctataacgaatgtagaccttcgtgaatacttgacagaa
gaagctcaagccaccgagaagaacacgacttatgacctcattgcaaatgtagtgcatgat
gggaaacccactgagggagcgtacagaatacatgttctgcatcatggaactggaaagtgg
tacgagatgcaggacctgcaggtgactgacatcctccctcagatgatcacactttcagag
gcttacatccagatctggaagaggcaagaaagcaatgatggaagaaacaaccacacaggg
atttaa
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