| Entry |
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| Symbol |
trpa1
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| Name |
(RefSeq) transient receptor potential cation channel subfamily A member 1
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| KO |
| K04984 | transient receptor potential cation channel subfamily A member 1 |
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| Organism |
onl Oreochromis niloticus (Nile tilapia)
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| Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:onl04040]
100701720 (trpa1)
Ion channels [BR:onl04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100701720 (trpa1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG9:complement(20077700..20120065)
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| AA seq |
1118 aa
MNFSRDVARQNSCYTYVIEDDDPGLASRNIFELAEKGDLALLENLVKKSPEVLSEKDECG
AGPLHHAAAGGHITLIQFISTVTDAQDLNSCDEQGNVPLHWAVERNKAESCKALLDLGAN
PNILNTALLSPLHLAVSHGHSNLVGVLLSYSSTDCNLKGDLGNTPLMLACSLNNCEALSI
LLKHGAKLCQQNKLGHFAMHAAAFAGAKKAMEVILKAGEELGHSAVCHINYLDKTKSSPL
HLAVRGGNIETIRLCIATGAKVDQQQNDKSTPLHLACTQGALEVIKLMLSSVERVEDIIN
LTDGACQTPLHRATIFDHTELAEYLISLGADINSTDCKGNSPLLLATSCGAWKTVALLLS
KGANVNVRDKCGCNFLHLAILQPKGLKNLPEEVLQLNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQLGLACKSKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDER
GLTPLHLASKEGHTKVVQLLLRKGALFHSDYKGWTCLHHAASEGYTQTMDILLSANLKLL
DKTDEDGNSALHIAARGGHVAAVRLLLARGAEIILNKNHTSFLHEALQNGRKDVVNAVID
SERCAEAVSLFNPESSQRCPILDMIEFLPETYKHLLDRCVRESDDDHNSPDYHIEYDFKW
LQAPIEVNKQTFNGNKVQPLAALNAMVQYNRIELLNHPVCKKYLAMKWVAYGSIAHVLNM
FLYLLGLLPLTHLIVTLRPSVNTSDTGEHDIIMVPVSFTEQPVSLSFCMVMVLVMNIYSI
GKEVVQISQQRWKYITDYSNQSDWISAIFSILFVVPLMINAEGSLHWQAGAIAVLNSWVG
FLLYLQRFEGVGIYVVMFGEIMKTLVRIVLLFFYLMLAFSLAFHALMLNQREFNSVPLSV
IQTFVMMVGELNYQNNFLDEYLNHRLPFGILTYFIFVVFVLFMPILLVNLMIGLAVGDIA
EVQRNAALKRIAMQIDLHTALEDKLPYWFMKRVDKNSITIYPNHRCSRHFLKKFFYGEEE
TNEVWNHLQAKSKACTLIENELKKQKTRMKEMSCLLEKQHCLVKLIIQKMEIASEADEYD
GPVNIRGSTWPALGQAKPSRETTSRWVPLMKAIEARRK |
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| NT seq |
3357 nt +upstreamnt +downstreamnt
atgaacttcagcagggatgtggcacggcaaaacagttgttatacatatgtgatagaggat
gacgatccgggcctggcgtctcgaaatatatttgagttggctgagaagggtgacctagct
ctcctggagaacctagtgaagaagagcccagaggtcctcagtgaaaaagatgaatgtgga
gccggtccccttcatcacgctgccgcagggggccacatcaccctcattcaattcatctcc
actgtcacagatgcacaagacctgaacagctgtgatgagcagggcaatgtgccccttcac
tgggcagtggagaggaacaaggcagagagctgcaaggctcttttggacctgggggctaac
cccaacatcctcaacactgccctcctgtcccccctgcacttggctgtcagccatggacac
agcaacctggtgggggtgctgttgtcctacagcagtacagactgtaatctaaagggagac
cttggaaacaccccactgatgctggcttgttcccttaataactgtgaggctcttagcata
ttgttaaagcatggagcaaagctttgccaacagaacaagcttggccatttcgccatgcac
gctgctgccttcgcaggtgcgaagaaagccatggaagtgattctcaaggctggagaggag
ttaggccactcggctgtgtgccacatcaactatttagacaagaccaagagcagtcccctg
catctggctgtacgtggtgggaatatcgagaccatccgcctctgcattgctactggagcc
aaagttgaccagcaacagaacgacaagtctacgccgcttcatttggcctgcacccagggt
gctcttgaggtcatcaaactgatgctgtcttctgttgagcgagttgaagatatcatcaat
ctcactgatggtgcatgtcagacccctctacacagggcgacaatatttgatcacacggag
ctggcggagtacctaatttctctgggtgcagacattaacagcaccgactgcaagggaaac
tctcctttgctgctggctacgagctgtggagcatggaaaactgtggctctgctgctgtca
aaaggagcaaacgttaacgtgagagacaaatgtggctgtaactttcttcacctggccatt
ctgcagccaaaggggctgaaaaacctgccggaagaagtactgcagctcaacagtgtgaag
gcacttttaagctgtgaggataacgagggctgcaccccactccactacgcctgcagactg
ggaatccacgactcagtgaagaacatgctgggcctctcggggcaacttggcctcgcatgc
aagtccaaggacaagaagtctgccctgcactttgctgctcagtatggccgcatcaataca
tgtcaccgattattagagtccattactgactctcgtctgctaaatgaaggcgatgagcgt
ggcctgactccactccatttggcctcaaaagagggacacacaaaagtggtgcaactgttg
ctgcgcaaaggcgctctcttccacagtgattacaagggctggacttgtctgcaccacgct
gcttctgaaggatacacacaaacgatggatatcctactgtcagccaatctcaagctgctg
gataaaacagatgaggatgggaactcggcactccacatcgcagcgagaggtggacacgtg
gctgcggtcaggctgctgctggccaggggggcggagatcatcttaaacaagaaccacact
tcattcctccacgaggctttgcaaaatgggagaaaagacgtggtcaatgctgtaattgac
agtgaaaggtgtgctgaagctgtaagtctgttcaatcccgaaagtagtcagcgatgcccc
atactagacatgattgagtttctgcctgaaacttacaagcatcttttggaccgctgtgtg
agggaatccgatgatgaccacaacagccctgattaccacattgaatatgacttcaaatgg
ctccaagctccgattgaagtgaacaagcagactttcaatgggaataaggttcagccactg
gccgctctcaacgcaatggtgcagtacaaccgcatcgagctcctcaaccatcccgtctgc
aaaaagtatctggcaatgaagtgggttgcttatgggagcatagctcacgtgctcaacatg
tttctctatctgttgggcttgctgcccttaactcaccttatagtgactctgagaccctct
gtgaacactagtgacacgggcgagcacgatatcatcatggttcccgtatctttcacagag
caacctgtgtccttgtccttctgcatggtgatggtcttggttatgaatatctactcgata
ggaaaggaagtggtgcagatatcacagcagcgctggaaatacatcacggattattccaac
cagagcgactggatttcagccatcttctctatactgttcgtcgtccccctcatgatcaat
gcagagggttctttacactggcaagcaggggccatagcagttttaaattcctgggttgga
tttctcctttatctccagaggtttgagggagttggcatctatgttgtgatgttcggggag
attatgaagacgctggtccgtattgtattgctgttcttctacctgatgttggctttcagt
ttggccttccatgccctgatgctcaatcagagggagtttaacagcgtgccgctctctgtg
atacaaacctttgtgatgatggtcggggaactgaactaccagaacaacttcctggatgag
tatctgaatcatcgactaccttttggtatcctgacatacttcatttttgtggtctttgtt
ctgttcatgccaatcctgctcgtgaacctgatgattggtttagcagttggagacattgct
gaagttcaaagaaatgctgcgctgaaacggatagccatgcagattgatctccacaccgct
ctggaagataagctcccttactggtttatgaaacgagttgacaaaaactccattaccatc
tatcccaatcacaggtgttccaggcactttctgaagaaatttttctatggtgaagaggaa
accaatgaagtctggaatcatctgcaagccaaatcaaaggcatgcactttgatcgagaat
gagctcaaaaagcagaagaccagaatgaaagagatgtcgtgcctgctggagaagcagcac
tgcctcgtaaagctcatcatccagaaaatggagatcgcctctgaggctgacgaatatgac
ggccccgtgaacatcagagggagcacgtggcccgctttaggccaggctaaaccaagtaga
gagactacatctcggtgggtcccactgatgaaggccatcgaggccaggcgaaaatga |
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