Oreochromis niloticus (Nile tilapia): 100701725
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Entry
100701725 CDS
T06104
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100701725 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100701725 (cstf2)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100701725 (cstf2)
U7-dependent histone pre-mRNA processing factors
100701725 (cstf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
100701725
NCBI-ProteinID:
XP_005467484
Ensembl:
ENSONIG00000002631
UniProt:
I3J355
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All DBs
Position
LG2:18980742..18998838
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AA seq
513 aa
AA seq
DB search
MANVSAANAAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDSVQPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTTVQPLIPSGQGGGAPTVTSPPTQPTVPVSQPV
SQPVPGMHVNGAPQMMQPPNMGVVPGPMPVPGPGPGPGPVGPPGNLQNSPTGSSGQAAIE
RPQGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRGYMGPPPPHQVPPVHMPQMGGA
PPPDMRPPMDMRGPPMGEPRNMMVDPRAPPMMEPRGPPMEARGRDPRAMDARVPVTAQRV
PIAPGMQGPVPHTMGPNAPPPARPGAGISGVPPSGGGFSPGQNQVSTQDQEKAALIMQVL
QLTPEQIAMLPPEQRQSILILKEQIQKTASGAP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtatctgctgccaacgccgccgctgcggccgcagctgcagccgcgaataga
gacccagccgttgaccggtcactacgatcagtgttcgtgggaaatattccgtatgaagcc
acagaagaacagctgaaagacatcttttctgaagtcggacttgttgtcagcttcaggtta
gtgtatgacagggagacaggaaagccaaagggatatggcttctgtgaatatcaagaccag
gagactgccctcagtgccatgcgaaacctgaatgggagagagtttagtggtcgggctctc
cgtgttgacaacgcagccagtgagaagaacaaggaagagctgaaaagtttgggaacagga
gcccccattattgagtctccttatggagacagcgtccagccagaggaggccccagagtcc
atcagcagagcagtagccagtctgccacctgagcagatgtttgaactcatgaaacagatg
aagctgtgtgtgcaaaacagtcctcaggaggcacggaacatgctgctgcagaaccctcag
ctggcctacgctctgctgcaggcccaagtggtcatgcggattgttgatcctgagatcgcc
ttgaaaatgctccatcgtcaaacaacagtccagcctctgattcccagtggacagggcgga
ggagcaccgacggtcacttctccacctacacagcccaccgtgcctgtgtctcagccagtg
tctcaacctgtgcccggaatgcatgtcaatggagcgccccagatgatgcagccccctaac
atgggagttgtccctggacccatgcctgtaccaggacctgggcctggaccgggaccagtt
ggacctccaggaaaccttcagaattctcccacaggatcgtctggtcaagctgctatcgag
cggcctcaaggaccaggcggtatccccccaagaggcctactgggagatggtcccaatgac
cccagaggaggaactctgctgtctgtcactggagaggtcatagaccccaaccggggttac
atgggacctccacccccccaccaagttccacctgtacacatgccacagatgggaggtgca
ccccctccagatatgaggcctccaatggacatgagaggcccacccatgggtgaaccgcgg
aacatgatggttgaccccagagcaccccccatgatggagccacggggaccccctatggaa
gccagaggccgtgatccaagggcgatggatgctcgtgttccagttacggctcagagggtt
cccatagcaccaggaatgcaaggccctgtccctcatacaatgggtccaaatgctcctcca
cctgcaagaccgggtgctggtatttctggggttcctccatcaggaggaggcttcagtcca
ggtcagaatcaggtttccacacaggatcaagagaaggctgccctcatcatgcaggtcttg
cagttgaccccagaacagatcgcaatgttgccaccggagcagcggcagagcattctcatc
ctcaaagagcagattcagaagacggcgagtggggcaccttga
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