Oreochromis niloticus (Nile tilapia): 100701892
Help
Entry
100701892 CDS
T06104
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100701892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100701892
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
NGL family
100701892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
100701892
NCBI-ProteinID:
XP_005471035
LinkDB
All DBs
Position
LG7:complement(58065886..58224106)
Genome browser
AA seq
647 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLNYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPPHHKGRYIGELDQNYFHCYAPVIVEP
PTDLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTESSFSYFTTVTVETIETPHNEGFTTTVQQKVGPT
PSAGTWESISPTSTTTTTVRTALSTRATEKTYTIPVTEVGGEGLQNGLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPPL
EHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgttctgctcctggccctccagctgctggtggtggca
ggactggttcgcgctcagacgtgtccctctgtctgttcgtgcagtaaccagttcagcaaa
gtcatctgcacgcgcagaggcctgcgggatgttcctgatggcatctctaccaacacacgc
tacttgaatctgcaagaaaatctcattcaagtcataaaagtggacagcttcaaacaccta
agacatctagagattctacagctgagcaaaaaccacatacgcaaaattgagcttggggcc
ttcaatggactggccagcctcaataccttggagctatttgataaccgcctcaccaccatc
ccaaatggggcttttgagtacttgtccaaactaaaggagctttggctaaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacgaaggctggacctt
ggggagctcaaacggctcaactacatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaatcttattcccctagtg
aagctggatgaactggaaatgtcaggaaatcagctatctgtcatccggcctggttcattt
aaaggccttatacacttacaaaagctgtggatgatgcatgcccagatccagaccatagaa
aggaatgcttttgatgacctgcaatcacttgtggaactcaatctggcccacaataacctt
accctcttgccccatgatctcttcactcctctacatcacctggagagggtgcacttacac
cacaacccttggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtacccgcaaacaccagctgctgtgcccgctgcagttcacctcctcaccataagggacgc
tacattggtgagctggaccagaattactttcactgttatgctcctgttattgtggagcct
cccacagacctaaatgtaacagagggaagtgctgcagagttgaaatgcagagccagctct
ttaacctcagtgagctggattacacccaatggttccatcatgacacacggtgcatacaag
gtcagaatctctgtgctgaatgatggcacactgaactttaccaacgttaccatgcaggac
acaggtacatatacgtgcatggtgagtaattctgcaggtaacacaacagcatctgccaca
cttaatgtttcctctacggaaagcagtttcagctactttactacagtgacagtggagaca
atagaaaccccgcataatgaaggcttcaccactactgtccaacagaaggttggccccaca
ccctctgctggtacatgggagtctatctcaccaacctctacaacaaccaccaccgtccga
accgcactctccacacgtgccacagagaagacttatacgattcccgtcacagaggtgggt
ggtgagggattgcagaatggcttggatgaggtaatgaagacaaccaagatcatcattggc
tgttttgttgcaatcacactcatggcagctgtcatgcttattatcttctataagatgcgc
aaacaacaccaccagcagaatcaccatgcacccacacgcactattgagatcatcaatgtg
gacgaggattgtgtaacaggaggcccgggcatggagggccaccttactctgcctcctctt
gagcatgagcacctcaaccactataacacctataagactgcatacaaccatgcctccaca
atcaattctatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaagac
aatgtacaagagacccaaatctaa
DBGET
integrated database retrieval system
