Oreochromis niloticus (Nile tilapia): 100701939
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Entry
100701939 CDS
T06104
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100701939 (pkd2)
04040 Ion channels [BR:
onl04040
]
100701939 (pkd2)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100701939 (pkd2)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100701939 (pkd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
YVC1_C
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
100701939
NCBI-ProteinID:
XP_003452262
Ensembl:
ENSONIG00000017449
UniProt:
I3KLL1
LinkDB
All DBs
Position
LG6:complement(17288188..17299477)
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AA seq
902 aa
AA seq
DB search
MSSSRVRPQQLPQNQAGRSAHKLDSSEGIEMENIQHQDLGLGGVVGTPSPPSRQAWSRDN
PGFEPEDEIMEADWPQASPGRRSASTASGSSCSSSGLGSYNRGGSSTNIPRGGLYPTPTL
EQQDRHGHPSCLKQILQKIRILWGTELMEESDSSRERYLRNVLREMLTYVAFLITICILT
YGMVSANMYHYTKVMSQLFLDTPLSAGDPSTFRSLSTMEDFWKFTEGPFLNGMYWEVWYN
NKSLPENQSLIYYENLLLGVPRLRQVKVHNETCSVHEDLRDEVQDCYNIYTLTNEDTAPF
GPKNGTAWLYTPESEMNSSSYSGQVSKYGGGGYYQDLSRTKEESAIQLQVLKDHLWLDRG
TRAVFLDFSVYNGNINLFCIARLLAEFPATGGVVTSWQFQTVRLIRYVSSWDYFVGMCEV
AFCLFILYYVVEEVLEIRIHRLHYFKSLWNCLDVLIVTLSVVAIIMNITRTAMVGNLLRG
LLENHTAHPSFEPLANLQVQFNNMAAVIVFFSWVKLFKFINFNKTMSQLSSTMSRCAKDL
VGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFNFSEIEEAHPVVG
PIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKSCNKALMKLRL
KKTAVDDISDGLRQAGGKLNFDELRQDLKGKGHTDAEIQAIFAKYDQDGDQELTEHEHQQ
MRDDLEKEREDLDLERSSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYE
EFQVLVRRVDRMEHSIGSIVSKIDSVIVKLEVMERANLKRRDVVSRLLDGVMEDEHLGRD
TDAHREQMERLVREELERWESDDMVSQVSHPQPATPVGPRPRPSSSLSTDGLDTGVNGSS
HV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatctcgagtcagaccccagcagctgcctcagaaccaggctggtaggtcggcg
cacaaactcgactcaagtgaagggatagagatggagaacatccagcatcaagacctgggt
ctcggtggagtcgtaggcaccccgtccccaccgtcgcgacaggcgtggagccgggataac
ccgggttttgaaccagaggacgagatcatggaagcagactggcctcaagcgagtcccggg
agaagatccgcgtccacggcctccggcagcagctgcagcagcagcggcctgggtagctac
aaccgtgggggcagcagcaccaacatcccccgaggaggactctatccaaccccgactttg
gagcagcaagacaggcatgggcatcccagctgtctcaagcagatactccagaaaatcaga
attctgtggggcacagagctgatggaggagagtgacagcagtcgagaaagatacctcagg
aacgtactgagggagatgctcacatatgtcgcattcctgatcaccatctgtatcttgacc
tatgggatggtgagtgcaaatatgtaccattacaccaaagtcatgtctcagcttttcctg
gacacacctctgtctgctggggacccctctacttttaggagcctgtcaaccatggaggat
ttctggaagttcacagagggacctttcctcaatggcatgtactgggaggtgtggtacaat
aataagagcctgccagagaatcagagtcttatctactacgagaacctcctccttggggtg
ccgcgcctccggcaggtcaaggtccacaatgagacctgttctgtccatgaagatctgagg
gatgaggtccaggactgctacaacatatacaccctgaccaatgaggatactgcccccttt
ggtcccaagaatggaactgcgtggttgtacaccccagagagcgagatgaatagcagcagt
tactcgggtcaggtgtctaaatatggaggtggaggatactaccaggacttgtctcgtacc
aaagaggagtcagccatccagctgcaggttctgaaagatcacttgtggctggacagaggc
actagggcagtcttcctcgacttctctgtctacaacggcaacataaaccttttctgcatc
gccaggttgctggcagagttccctgctactggtggcgtagtgacctcttggcagttccag
acggtgcgtctgatacgatatgtgtccagctgggactattttgtggggatgtgtgaagtg
gctttctgcctattcattctctattatgtggtggaggaagtgttggagatccgcatccac
cgcctacattacttcaagagcctgtggaactgtctcgatgttctcattgtcacattgagc
gttgttgctattatcatgaacataacgagaacagccatggttggaaacctgctgagaggc
ctgttggagaaccacactgctcaccccagctttgagcctttagccaacctgcaggttcag
tttaacaacatggctgcggttattgtcttcttttcctgggtcaagctttttaagttcatc
aacttcaataagaccatgagtcagctgtccagcaccatgtctcgctgtgccaaggacctc
gtgggttttgccatcatgttcttcatcattttcttggcttacgctcagctggcctacttg
gtgtttggaactcaagtcaacgatttcagcactttccaagccagcatatttacccagttc
cgtatcattttgggagactttaacttctcagaaattgaggaagctcatccagttgttgga
cctatatactttacaacctttgtcttcttcattttctttattctcatgaacatgttcttg
gccattatcaatgacacatactctgaggtgaaggctgacatgtcccaacagaggtctgag
atggaaatgacagaccttattaagaagagttgtaacaaagctttgatgaagctgagacta
aagaagacagcggtagatgacatctcagacggtttgcgtcaagctggggggaaactgaat
tttgatgaactccgtcaggatctaaaaggaaagggtcacacagatgcagagattcaggcc
atctttgccaaatacgatcaggatggtgatcaggagctgacagagcatgaacaccagcaa
atgagagacgacctggagaaagagagagaggacttggatctggaacgcagttcgctgact
cgacccagtagtgggcggagcttccctcgtacccaggatgactcagaggaggatgacgat
gaggacagcggtcacagctctcgacgtcgtggcagcagctctgggggtgtctcgtatgag
gagtttcaagtgctggtgagacgcgtggacaggatggagcactctatcggcagcatagtg
tcgaagatcgattcagtgattgtgaagctggaagttatggaaagagctaatcttaaaaga
agagacgtggtgagcaggctgctggatggagtcatggaggatgaacatctggggcgggac
acagacgcacacagggagcagatggagaggctcgtcagggaggagctggagcgctgggag
tccgatgatatggtctcacaggtcagccacccacagccggccactcctgtcggcccgcgg
cctcgcccttcctcgtccttgtccaccgacggcctcgacacaggcgtgaatgggagcagc
catgtgtga
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integrated database retrieval system
