Oreochromis niloticus (Nile tilapia): 100702066
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Entry
100702066 CDS
T06104
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100702066 (rfwd3)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100702066 (rfwd3)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100702066 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
WD40_CDC20-Fz
WDR55
zf-rbx1
zf-C3HC4_3
Beta-prop_WDR3_1st
zf-ANAPC11
Rtf2
EIF3I
Beta-prop_EML_2
zf-RING_5
zf-RING_11
WD40_Prp19
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
CFAP43_N
WD40_WDHD1_1st
zf-C3HC4_4
WD40_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
NSRP1_N
zf-UDP
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100702066
NCBI-ProteinID:
XP_005449320
Ensembl:
ENSONIG00000010818
LinkDB
All DBs
Position
LG7:complement(3928709..3949801)
Genome browser
AA seq
711 aa
AA seq
DB search
MEAMEVDSPVELQGIGQPEGGAAAPAGDAENANAALVMSDSGSSTEVDEDDDDDGSAEGQ
AAAYAPPRLPATWAFSQRAVGGATSTPPIRRRVRQGLRVHYPSQTAAPSRGFPDFLLRAP
AAGTAEPESGSTTEISESEDEAEGEEESTAAAAEPIDPAPPAGSDLSATVQPAQPQEAAT
TNSTATAEPERAEAQVQDVQVSSAVLSPSDENEGDTCTICFEAWTTAGEHRLAALRCGHL
FGYTCIQRWLKAQSPSAKCPQCNKKAKRSDIVLLYAPKLRALDNTEQESLKKSLEQEQSL
RRKAELESAQYKIKLQVVTNKYGQAQQELQELRALIAQTSRNLNPASSSTSSSSSHVLSL
SQRADGSRSAQYSFSKAVLVSQAGGCRVLSYCEPLSCLLASQPSPHTTLVPGCGVKKVSV
VNMRASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNAGKPVWS
CCWCLDNSNYIYAGLSNGSVLIYDTRDTSTHVQELVPLRSRCPVASLCYVPRAASSSFPC
GGLIAGSLEGGCFWEQVNEATYRPHVLPLETSGCTDIQVETESRHCLVTYRPGRSNPSLR
CVLMALTRTPQQDSSELPSCSCEPVQTFNAGSSCKLLTKNAVFRSPDGGGTLVCAGDEAS
NSTMVWDASSGVLRQKLPADLPVLDISPFSVNGEHFLASLTEKMLKLYKWE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtagactctcctgtggagctgcaggggattgggcagccagagggt
ggcgctgcagctcctgcaggtgatgctgagaacgccaacgctgctctcgtcatgtccgac
tctggcagcagcactgaagtagacgaagatgatgatgatgatggcagcgctgagggacag
gcggcagcttatgctcctccaaggcttcctgccacttgggcgtttagtcagagggcggtg
ggcggggctacatctacgccgccaatacgaaggagagtcaggcagggcctcagagtgcac
tatccgagccagactgcagcgccctctagaggctttccagacttcctgctgcgagcgcca
gctgccggcacagcagagccagagtcgggcagcaccactgagattagtgagtctgaggat
gaggcagagggtgaagaagagagcacggctgctgctgcagagcccatcgaccctgcgccg
cctgctgggtctgacctcagcgccaccgtccaacctgctcaaccacaggaagccgctacg
accaactccactgccacggcagaacccgagagggcagaagctcaagtccaggatgttcag
gtgtcctcagcagttctgtctcccagtgacgagaatgaaggcgacacctgcaccatctgc
ttcgaggcgtggacgacggccggcgagcacagactcgccgctctgcggtgcggtcacctc
ttcggttacacctgtatccagcgctggctgaaagctcagagcccatccgctaaatgtccg
cagtgtaacaagaaagcaaagcgttccgacatcgtgctcctgtacgctccaaaactgaga
gcgctggacaacacggagcaagagagcttaaagaagtctctggagcaggagcagtctctg
aggaggaaggctgaactggagtcggctcagtacaaaatcaaactgcaggtcgtcaccaac
aaatacgggcaagcacagcaggagctgcaggagctgagagccctcatagcccagacgagc
aggaacctgaatcccgcctcttcttccacgtcctcctcctcctcccatgtcctcagcctg
tctcagagggcggacggctccaggtctgctcagtacagcttctccaaggcggtgctggtg
tctcaggccgggggctgcagggttttatcgtactgtgaacctctgagctgcctgctggcc
tcacagccgtcgcctcacaccacgctggtgcccgggtgcggggtaaagaaggtcagtgtg
gtgaacatgagggccagtcagtacgttcccatccacagcaaacagatccgaggtctgtcc
ttcaacaggcagaacgacagcctgctgctgtctgctgcattggacaacactattaaactg
accagcctgctgaccaacacggtagttcagacctataatgcgggtaaaccagtgtggagc
tgctgctggtgtttggacaacagtaactacatctacgccggcctgagcaacggctctgtg
ctcatctacgacacgagagacaccagcacccacgtgcaggagctcgtgccgctgcgctcc
agatgtccggtggcgtctctgtgttacgtcccgcgggcggcgtccagctcattcccatgt
ggggggctcattgctggctctctggagggcgggtgtttctgggagcaggtgaacgaggcc
acctacaggccccacgtcctgcccctggagacctccggctgcaccgacatccaggtggag
acggagagtcgacactgtctcgtcacatataggcccggtcgctccaatccatctctgcgc
tgtgtcctcatggcgctaactcgaacccctcagcaggactcgagtgaactgcccagctgt
tcctgcgagccggtgcagacgttcaacgccggctcgtcctgcaaactgctcaccaagaac
gccgtcttcaggagtccggacggaggcgggacgctggtctgtgccggggacgaggcctcc
aactccactatggtatgggacgccagcagcggcgttctgcgccagaagctaccggccgac
ctcccggtgctggacatcagcccgttttctgtgaacggcgagcactttttggcatcgctt
acggagaaaatgctgaagctctacaagtgggagtga
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integrated database retrieval system
