Oreochromis niloticus (Nile tilapia): 100702187
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Entry
100702187 CDS
T06104
Symbol
nfkb1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04210
Apoptosis
onl04218
Cellular senescence
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04623
Cytosolic DNA-sensing pathway
onl04625
C-type lectin receptor signaling pathway
onl04920
Adipocytokine signaling pathway
onl05132
Salmonella infection
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100702187 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100702187 (nfkb1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
100702187 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
100702187
NCBI-ProteinID:
XP_019219060
Ensembl:
ENSONIG00000004349
LinkDB
All DBs
Position
LG2:8974639..9006298
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AA seq
931 aa
AA seq
DB search
MAGDDHYLHAPNQMFDNIMMDPTWEFPHFAMPQTTSLRTVDGPFLQIVEQPKQRGFRFRY
GCEGPSHGGLPGATSEKNRKTYPTVKICNYQGQARVVVQLVTALTAVPHLHAHSLVGKQC
DKGICIADLQSKDSTISFPNLGILHVTKKNVAKTLEERMIEAFKLGYNCGVSIHPDIDSV
QGEVRVPREVTEHHLSVIRNAAAMQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEP
IYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTWEALG
DFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQILDKEE
VQRKRQKTLPNFQDFSGHGGGSLYRGGGGGGGPAAGGGPGSTGYYQGFTTYNYGGGGGGG
GGFTTGYSAGLGGGGGGIKHASQNGAADNDGDDNDPDDDSPSGXVLRAPARPEAVERGEE
GGVSVEPEFDAKEQLDQVTSRLLDAIFHYSVTADSAYLLAPQAPXWPRRMXTETPGSIWL
FSTTSRALKSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQKEAVEALLLAGADPTLT
DRHGNTVLHLAAQHEGGGMIQFLLQHRELRELLDQTNTAGLCAIHLAVLANQLSSLRELL
EGGANVEIQERSCGRTALHLATETDNVSLAGCLLLEGNAKVDCCTFDGSTPLHIAAGRGS
VKLTALLMAAGADPRKENFEPLFFREEDEEESCEKESEDEEEDEGYIPGTTPFSMAATLQ
VFDLLNGKEYEPKTPQTAFIPPQGDLANLDTEVKQALCGTLESEGCWENLAHSLGLGILN
TAFRLSPSPAKTLLDSYEVSGGTIRELLAALRSVGECRALSILEEALHESEEAPATNEMS
GELLCMRVQELKVDTRIDSGVCDSGVELSTA
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacgaccactacctacacgctcccaaccagatgttcgataacatcatgatg
gacccgacatgggagtttccacattttgcgatgcctcaaacgacatctctgcggacagtg
gacggaccgttcctgcagatcgtggagcagcccaaacagcgcggcttcaggttcaggtac
ggctgcgaggggccgtctcacggcggtctgccgggggccaccagcgagaagaacaggaag
acctaccccaccgtcaagatctgtaactaccagggtcaggcccgggtggtggtccagctg
gtgacggcgctgaccgccgtccctcacctgcacgctcacagtctggtgggaaaacagtgc
gataaaggaatctgtatcgccgacctgcagtccaaagactccaccatcagcttcccgaac
ctggggatcctccacgtgacgaagaagaacgtggcaaagactctggaggagcggatgatc
gaggccttcaagctgggatacaactgcggggtctccatccaccccgacatcgacagcgtt
cagggggaggtcagagtcccccgagaagtcacagagcaccatctcagtgtgatcagaaat
gctgccgctatgcaggccaaagagatggacctcagcgtggttcggctcatgttcacggcg
ttcctccccgacagcgacggcggcttctccaggcggctcgagcccgtggtgtccgagccg
atctacgacagcaaggctccgaatgcctccaacctgaagatcgtgaggatggatcggacc
gccggctgcgtgaccggaggagaggaggtctacctgctctgcgacaaagtccagaaagat
gacatccaggttcggttctatgaggaggatgactcgggtctcacctgggaggctctggga
gacttctcccccacagacgtccacagacagttcgccatcgtatttaagacgccaaagtat
cgagaccagaacctgcagaaaccgacgtctgtgttcgtccagctgaagaggaagtccgac
aacgagaccagcgagcctaaacccttcacctaccacccccagatcttagacaaagaggag
gtgcagaggaagaggcagaagactttacccaacttccaggacttcagtggtcatggagga
ggaagtctatacagaggaggaggaggaggaggaggtccggctgctggaggaggacctgga
tccacaggatactaccagggcttcactacctacaactatggaggaggaggtggaggagga
ggaggtttcaccacagggtactcagcaggtctgggaggaggtggaggcgggatcaaacat
gcctctcagaacggcgccgcagacaacgacggtgatgacaacgacccggacgacgactcg
ccatcagggnccgtgctgcgagctccagcccggcccgaagccgtggagaggggcgaggag
ggaggggtcagtgtggagcctgaatttgatgccaaggagcagctggatcaggtgaccagc
agactgctggacgccatctttcattactctgttacagctgactcggcgtacctgctggct
ccacaggctccctgatggccgcgcaggatgtaaacggagacaccgggctccatttggctg
ttctccacaaccagcagggcgctgaagagtctgacgcaggtggtgtctgccctgcccgga
gaggaggtgctcaacatgaggaaccacctgtaccagactcctttgcacctggccgtgatc
acgcagcagaaggaggcagtggaagcgctgctgctggctggcgccgacccgactctgacg
gatcgtcacggcaacacagtgctgcacctggcagctcagcacgagggaggagggatgatc
cagtttttactgcaacacagagagctgagagagctgctggaccaaaccaacacagcaggt
ctgtgtgcgatccacctggcggttctggccaaccagctgtcttctctcagggagctgctg
gagggcggggctaatgtagaaatccaggaacgcagctgtggacgaacggccctccatctc
gccaccgagactgacaacgtatcgctggcgggctgcctgctgctggagggaaatgccaag
gtggactgctgcacctttgatggctccacccccctccacattgctgcgggtcgaggctct
gtcaagctcacggctctcctcatggctgcaggtgcagacccacggaaggagaactttgag
ccactgttcttcagggaggaggatgaggaggagagctgtgaaaaggagagtgaggatgag
gaagaagatgaagggtacatcccagggacaactcccttcagcatggctgccacccttcag
gttttcgatcttctgaacggcaaagaatacgaaccaaaaacacctcaaacggccttcatc
cctcctcaaggtgacctggcaaacctggacacagaggtgaagcaggcgctgtgtggcact
ctggagagtgaaggatgctgggagaatctggctcacagtctgggtcttgggatcctcaac
acagcattcaggttgagcccctcccccgctaaaaccctgctggacagctacgaggtttcc
ggtggaacgatcagggagctgctggctgctctgaggtcagtcggcgagtgcagagcgctg
agcatcctggaggaggcgctgcacgagagcgaggaagcgcctgccaccaacgagatgagt
ggtgagcttctgtgcatgcgggttcaggaactgaaagtggacactcgaatcgacagcggg
gtctgcgacagcggggtggagctttccacggcataa
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