Oreochromis niloticus (Nile tilapia): 100702192
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Entry
100702192 CDS
T06104
Name
(RefSeq) thyroid hormone receptor alpha-B isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04080
Neuroactive ligand-receptor interaction
onl04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100702192
04081 Hormone signaling
100702192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100702192
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100702192
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100702192
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
100702192
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100702192
NCBI-ProteinID:
XP_005453839
Ensembl:
ENSONIG00000018247
UniProt:
I3KPD4
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Position
LG8:5961356..6126746
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AA seq
409 aa
AA seq
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MEHMPKEQDSNPSEGEEKQWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMA
MDLVLDDSKRVAKRRLIEENRERRKKEEMVKSLQSRPEPTGAEWELIRLVTEAHRHTNAQ
GSQWKQKRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAMRYDPDSETLTLSGEMAVKREQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCTDKIEKCQETYLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaggactctaacccatcagagggagaagagaaacagtgg
ctcaatggcccaaaaaggaagaggaagaacagccaatgttcggtgaagagcatgactggg
tacattcccagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaggccaca
ggttaccactaccgctgcattacctgcgagggctgcaagggtttttttcgtaggaccatt
caaaagaacctccacccgacctactcctgtaagtacgatggttgctgcatcatcgacaag
atcacccgcaaccagtgccagctgtgccgcttcaagaagtgcattgctgtgggcatggcc
atggacttggtactggatgactcaaagcgggtggctaaacggcgcctgattgaggagaac
agggagcggcgtaagaaggaggagatggtaaaatccctccagagccgtccggagcccacg
ggggccgagtgggagctgatccgcttggtgacagaggcccatcgtcacaccaatgctcag
ggctcacagtggaagcagaagcgcaaattcctgccagagaaaatcggccagtctccagtc
gctccaacatcagacggagacaaggtggacctggaggccttcagcgagttcaccaagatc
atcactcccgccatcacccgtgtcgttgactttgccaaaaaactgcccatgttctctgag
ctgccttgtgaagaccagatcatcctgttgaagggctgctgcatggagatcatgtccttg
cgcgcagccatgcgctacgacccggacagcgagacgctgacgctcagtggggagatggct
gtgaagcgggagcaactgaagaacggcgggctgggcgtggtgtcggacgccatctttgat
ttgggcaagagcctggcacagttcaaccttgacgacacggaagtggcgctcttgcaagcc
gtgcttctcatgagctcagatcgctcaggcctgacctgtacggacaagatcgagaagtgc
caggagacgtacctgctggcgttcgagcactacatcaactaccgcaagcacaacattccc
cacttctggccgaagcttctgatgaaggtgacggacctgcggatgatcggggcgtgccac
gccagccgcttccttcacatgaaggtggaatgtcccaacgaactcttccccccgctcttc
ttggaggtcttcgaggaccaggaggtgtga
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