Oreochromis niloticus (Nile tilapia): 100702196
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Entry
100702196 CDS
T06104
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04137
Mitophagy - animal
onl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100702196
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100702196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100702196
03009 Ribosome biogenesis [BR:
onl03009
]
100702196
04131 Membrane trafficking [BR:
onl04131
]
100702196
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100702196
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100702196
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100702196
Membrane trafficking [BR:
onl04131
]
SNARE
SNARE associated proteins
Others
100702196
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100702196
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100702196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
Vps4_C
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Parvo_NS1
ATPase_2
DUF815
nSTAND3
Mg_chelatase
AAA_7
ATPase
AAA_18
IstB_IS21
ABC_tran
AAA_17
TsaE
NACHT
AAA_24
ResIII
Sigma54_activat
NB-ARC
PhoH
Viral_helicase1
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
100702196
NCBI-ProteinID:
XP_003450022
Ensembl:
ENSONIG00000016404
UniProt:
A0A669CSG5
LinkDB
All DBs
Position
LG6:complement(31021174..31031547)
Genome browser
AA seq
806 aa
AA seq
DB search
MPGSGGADPKGEDYSTAILKQKHRPNRLIVDEAVSEDSSIVSLSQQKTEELQLFRGDTVV
LRGRKRRQTVCIVLTDDTCGDERIRMNRVTRNNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLSGNLFDVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAENNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLAQDVDLERIATETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDETIDADLLNSMAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDKPSRTAILK
ANLRKSPVARDVDLEYLSGITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
SQSGSQGSGSGRPSLYRDEGDDDLYQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagacccaaagggagaagattactccactgctatcctgaag
cagaagcatagaccaaacaggctcattgtggatgaagctgtcagtgaagacagcagcatt
gtcagcctatcacagcaaaagacagaggagctccagcttttccgaggagacactgtggtg
ctcagagggcggaaacgacggcaaacagtgtgcatcgtcctgacggatgacacctgtgga
gatgagcggattcggatgaaccgtgtgacgcgcaacaacctgcgtgtccggcttggtgac
gtcatcagtatccatgcctgtcctgatatcaaatatgggaaaaagatccacgtgctcccc
atagatgacactattgaaggcctatcagggaacctctttgatgttttcctcaaaccgtac
tttctggaggcttaccggcctgtgcacaaaggtgacatcttcttggtgaggggaagcatg
cgagctgtggagttcaaggtggtggagacagaccccagtcctcactgcatcgttgcccct
gacacagtcatctactgtgagggagagccaattaagagagaggatgaagaggagagtctc
aatgacatcggctacgatgacattggaggctgccggaagcagctagcccagatcaaagaa
atggtggagcttcctcttagacacccgggactgtttaaggctatcggagttaagcccccc
agaggtatcctgctgtacggccctgcaggaacaggaaagaccctggtggcccgagctgta
gcaaatgaaactggtgccttctttttcctcatcaatggtcccgagattatgagtaagctg
gccggagagtcagaaagcaacttaagaaaagcatttgaggaggcggagaataacgccccc
gccatcatcttcatcgatgagctggatgccattgctcccaagagagagaagactcatggt
gaggtggagaggcgtatagtgtcccagctcctgaccctgatggatggcttgaagcaaaga
gctcatgtgattgtcatggctgcaacaaaccgaccaaacagtgtggacccggctctgagg
cgctttggcaggtttgaccgtgagattgatattggaatcccagattcgactggtagattg
gagatcctgcagatccacaccaaaaacatgaaactggctcaagatgtcgatttggagagg
attgccacagagactcatggccacgtgggtgctgacctggctgctttgtgctcagaagct
gctctgcaagccatccggaagaaaatgaccctcatagatctggaggatgagaccatcgac
gctgacctgctcaactcaatggctgtcactatggatgacttccagtgggctttaagtcag
agcaacccatcagctctgagagaaacggttgcagaggtgcctcaggtcaactgggaggac
atcggtggactggacgaggtcaagcgagaactgcaagagcttgtccagtaccctgttgag
tatcctgacaaattcctgaagtttggaatgaccccatctcgtggagttttgttttacggc
cctccaggctgtgggaaaaccctactggctaaggccatcgccaatgaatgccaagctaac
tttgtctcgatcaaaggacctgagatgctcaccatgtggtttggagaatcagaggcaaat
gttagggatgtgtttgataaggccagacaggcagccccctgcatcttgttttttgatgag
ctagactccatcgctaaatctagaggaggcggtgcaggtgatgcaggtggtgcagctgac
agagtcatcaaccagatactcacagagatggacggcatgtcggacaaaaagaacgtcttc
atcatcggtgccacaaacaggccagacatcatagacccagccattctgcggccaggtcgt
ctggatcagctcatctacatcccgttgcctgataagccatctcgcacagcaattcttaaa
gccaatctacgcaaatcccctgttgcaagagatgtggatcttgaatacctttctggcatc
acagatggattttctggagctgatctgacagagatctgtcagcgggcctgtaagctggcc
atccgtgaggcaatagaggccgagatcaaggctgagcgtcagaggcagaacagaccaggc
atccctatggatgaggactttgatccagtcccagagatcaggaaggaccactttgaagag
gcgatgcgatttgcccgtcgctctgttagtgacaacgacatccgcaaatatgagatgttt
gctcaaactctgcaacagagccgaggttttggaaacttcaggtttccttctgctactggt
tcccagtctggaagtcagggctctggatctgggaggccgagtctgtacagagatgaaggc
gatgatgatctctaccagtga
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integrated database retrieval system
