KEGG   Oreochromis niloticus (Nile tilapia): 100702225
Entry
100702225         CDS       T06104                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:onl04131]
    100702225 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100702225 (copb2)
Membrane trafficking [BR:onl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100702225 (copb2)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100702225 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st PEP5_VPS11_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_LRRK2 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Clathrin HEAT_GCN1
Other DBs
NCBI-GeneID: 100702225
NCBI-ProteinID: XP_005461760
Ensembl: ENSONIG00000014597
LinkDB
Position
LG14:7841935..7853697
AA seq 1203 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVVSLYSGTVVVWNHETQMIVKTFELCELPV
RVAKFVARKHWVITGADDMQVRVFNYNTLERVHLFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWLCSQVFEGHSHYVMQIVINPRDNNQFASASLDRTIKVWQLGSKAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVSFHPQ
LPIILTGAEDGTVRVWHSNTYRLENTLNYGMERVWCICGQPSSNSVAIGFDEGSIIIKIG
RVEPVMSMDSSGKVIWARHSEVQQANLKALTETEIRDGARLPLSVKDLGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFIWAHDSSQYAVREGNSVVKIFKNFKE
KKTFKPEFGAEGIFGGCLLGVRSNSGLAFYDWESSELIRRIEIQPKHVLWSDSGELVCIA
TDESFFVLRYLPERVSTAQESKEGVTEDGIEAAFEVLGEVQEVVKTGVWVGDCFIYTSSV
NRLSYYVGGEIITIAHMDRTMYLLGYIPKDDRLYLGDKELNVISYSLLLSVLEYQTAVMR
KDFSTADKVLPTIPKEQQTRVARFLEKQGFRQQALVVSTDPEHKFELALQLGELKTAYQL
ALKAESEQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATTSGNVDMVGQLAEGAE
SDGKTNVAFLTYFLQGRVDKCLDLLIKTDRLPEAAFLARTYVPSHVSRVVKLWKESLSKV
NQKAADALADPSQYTNLFPGLQQALLAEQYLKETHVGVRPAAEYSLITPNEERSVLEESA
GFRSKGEITDSEPGAESISEAAIVPVVTESTYSEVAVVEEDTSLKQESTDPVSASEEESV
LRAADPFPIVATEEQAVSESCEFKAVKVGTKADTLVSVEEITRMPDEEAEMVRLSPVEDV
GSCVKKDLELSPATEAPPAVCASETETTLTTQEAPNEALAAEDVLVSAGLTVDNEVMSEP
IAPGEMIIQDLEKDTIPSEVPGTMGGAAETEETPVTCELVAETAPSHTAVEELISFETAD
VPALNTAVQILPELTLDPLLDSLEDAVPVLKRVPAQEREQEKQTGELPVKPPVIHKAEPE
VLALAVAHAEGNAAEEKEEGPERPEVLPEDLEANDEALDDLDNFDLDVIDTTDVNLDEDF
LGE
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgcctctgagactggacatcaagcggaagctgacagctcggtcagaccgggtgaagagt
gtggacctgcatcccactgagccgtggatggtggtcagcctctacagcggcaccgtggtg
gtctggaaccatgaaacacagatgatagtgaaaacattcgagctgtgtgaactgcctgta
agagtggccaagttcgtagccaggaaacactgggtcatcactggagccgatgacatgcag
gtccgtgtgtttaactacaacacgctggagagagttcacttgtttgaggctcactctgac
tacatccgatgcatcgctgtccaccccacacagccatacatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggacagaaagtggttgtgcagtcaggtgtttgaggga
cacagtcactatgtcatgcagattgtcatcaaccccagagacaacaaccagtttgccagt
gcctctctggacaggactattaaggtgtggcagctgggctccaaggctcccaactttact
ctggagggtcatgagaagggagtgaattgtattgattactacagtggaggagacaagccc
tacctcatatcaggggctgatgatcgcctggtcaagatctgggattatcagaacaaaact
tgtgttcagactctggagggtcacgctcagaatgtgacctgcgtcagcttccatcctcag
ctgccaatcattctcacaggtgctgaagatggcactgttcgtgtgtggcactccaacacc
taccggctggaaaacacactcaactatggcatggagcgggtgtggtgtatatgtggccag
cccagctccaacagtgtggctataggctttgatgaaggcagcatcatcatcaagattggt
cgagtggagcccgtcatgtccatggactctagcgggaaggttatctgggctcgtcactct
gaagtgcagcaggccaacctaaaggcactgacagagactgagataagggatggagcgagg
ctccctctgagtgtgaaggacctgggaagctgtgagatttacccccagacaatccaacac
agccctaatgggagatttgtagtggtgtgtggggatggggagtacatcatctatactgcc
atggctttgaggaacaagagctttggctctgctcaggagtttatctgggcgcacgactct
tcacagtatgcagtcagagaaggcaacagtgtggtcaaaatatttaagaacttcaaagag
aagaagacattcaaacctgaatttggagctgaaggcatctttggtggctgcctactagga
gtgaggtcaaacagcggcctggccttctacgactgggagagctctgaattgatccggcgt
attgagatccagcctaaacatgtcttgtggtctgactctggggagctcgtctgtatcgct
acagatgagtcttttttcgtgctgcgctacctaccagagcgagtgtccacagcccaggag
tctaaagaaggggtgacagaagatgggatagaggctgcctttgaggtgctgggggaggtc
caagaggtggtaaagacaggggtttgggtgggagactgcttcatctacaccagctctgtt
aacagactcagctattatgtaggaggagagataatcaccattgctcacatggacaggacg
atgtatctgcttggctacatcccgaaggatgaccgtctctacctcggagacaaggagctg
aacgttatcagctattcgctgctgctttctgtgctagaatatcagacagctgtcatgagg
aaggacttcagcactgctgacaaggttctacccacaattcccaaggagcagcagacccgt
gtagcccgcttcttggagaaacagggctttaggcagcaggccctcgttgtgtccactgac
ccagagcataagtttgaacttgctctgcagctgggagagctcaagacagcctatcaactg
gccctgaaagcagagtcagaacaaaaatggaagcagctggcagagcttgcaactacaaag
tgccagtttagcttggctcaggagtgtctccaccaagctcaggattatgggggattattg
cttctggccaccacttcgggcaacgttgacatggtgggccaactggctgagggggcagag
agcgatgggaagaccaacgtggccttcctcacctacttcctgcaggggagagtggacaaa
tgtctggaccttttgatcaaaacagatcgactgccagaagctgcattcctggcaagaaca
tatgtgcccagccatgtctcaagggtggtgaagctgtggaaggagagtctttccaaggtc
aaccagaaggcagcagatgctctggctgaccccagccagtacaccaacctgttccctggc
ctccagcaggccctgctggctgagcagtacctgaaggagactcatgtcggggtcagacct
gctgcagaatactctctcattacgccaaatgaagagcgcagtgttctggaggaatcagca
ggttttagatctaaaggagaaatcacggactcagagccaggggcggagagcattagtgag
gccgccattgtgccagtagtaacagaaagtacatattcagaagttgcagtagtggaggag
gacacttcactaaaacaagagtcgactgatcctgtttcagcaagtgaagaagaatctgtc
ctgagagcagcggacccttttccaattgttgctacagaagaacaagcagtgtcagaatca
tgtgagtttaaagcagtgaaggttggcactaaagcagacactctagtctctgtagaggag
atcaccaggatgcctgatgaggaggctgagatggtacggctcagtcctgtggaagatgtc
gggtcatgcgtgaagaaagacctggaattatctccagcaactgaagctccacctgctgtc
tgtgcttctgaaacagaaaccactctaacaacacaagaagcaccaaatgaggcattagca
gctgaggatgtcctggttagcgctggtctgacggtcgataatgaagttatgtccgagcct
atagcacctggggaaatgatcattcaagatctggaaaaagatacgatcccctcagaagtt
ccaggtacaatgggtggagcagcagaaacagaagagactcctgttacgtgcgaacttgtt
gcagaaacagcaccttcacacacagcagtggaggagctcatctcttttgaaaccgcagat
gttccagcgctgaacacagctgtccagattttaccggagctgaccctcgatcctctgcta
gactcgcttgaagatgcagtgccagtactgaagcgagtcccggcgcaggaacgagaacaa
gagaaacaaactggagaacttccagtaaagcctcctgttattcacaaggctgagccagag
gttttagccctcgccgtagctcatgcagaaggaaatgcagcagaagagaaagaggaaggt
cctgaaagacctgaggtactgccagaggacctcgaggcgaatgatgaggccctggatgat
ctggacaactttgacctggacgttattgacaccacagatgtcaacctagatgaagatttc
ctgggtgaatag

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