Oreochromis niloticus (Nile tilapia): 100702242
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Entry
100702242 CDS
T06104
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04210
Apoptosis
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100702242 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100702242 (sptan1)
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100702242 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
100702242 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
RecG_N
Motif
Other DBs
NCBI-GeneID:
100702242
NCBI-ProteinID:
XP_003439506
Ensembl:
ENSONIG00000011270
LinkDB
All DBs
Position
LG7:8261607..8299807
Genome browser
AA seq
2479 aa
AA seq
DB search
MDTAGVKVLETAEDIQERRQQVLDRYRRFKELSIMRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAEAIIKLDKTGNLMITEGHFASDTI
RTRLEELHHLWDLLLEKTKEKGMRLLQAQKLVQYLRECEDALDWISDKEAIATSEELGQD
LEHVQLLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQESHPEGELIVRKQDEVNAAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMGSDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKTLGGDAEHLQQTHPQNASQIHLKKDELITNWEQIRTLSTERRARLNDS
YQLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRTT
DEAGQALLSAGHYASDEVKEKLGVLAAEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHDRAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVSGHMEEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVVRYEALREPMAARKQKL
SDSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRI
KAVTQKGEAMVEEGHFAGEDVKAKLAELHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIALRQDQIENQLVTKEACSVSVRMKQVEELYGTLLELGE
KRKDMLEKSCKKFMLFREANELQQWIHEKESTLTNEEMGSDLEQVEVLQKKFDDFQKDLK
ANESRLRDINKVASELESEGLMAEEAPMVQAQQQELLGAAPGKDEADSKTASPWKNIRLA
VQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESVDDIQEKCTELN
TAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDRERADLEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLIGADHYAKPEILNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTG
NALIQRGACAGSEDAVKARLGALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDTT
QVKDKRDAVNGRFAKIKNMAASRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYG
RDLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHWK
ELKDLSGARGKRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVNDVCANGEELIKKNNHHVDNISAKMSALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITTLKDQLLAAKHVQSKAIEARHAALMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHEAFRSSLSSAQADFNQLAEL
DQQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAME
EALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFK
HFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMA
FMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKEQADYCLSHMKPYLDSKG
RELPSAFDFVEFTRSLFVN
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcaggagtcaaagtgctggagacagctgaagatatccaggaacgtcggcag
caggtcctggaccgctaccggcgtttcaaggagctgtcgataatgcgccggcagaagctg
gaggactcgtatcgctttcagttcttccgccgtgatgctgatgaattggagaagtggatc
caggagaagctgcagattgcctctgatgagaactacaaggacccttccaacctgcagggc
aagctgcagaaacatcaagcttttgaagctgaagttcaggccaacgctgaagcaatcatc
aaactggacaagactggaaatctaatgatcactgagggccactttgcgtctgacactatt
cgaactcgtctggaggagctccatcacctgtgggacctcctgctggagaaaaccaaggaa
aagggcatgcgtctgttgcaggcccagaaactggtccagtatctgcgtgagtgtgaagat
gccctggactggatcagtgacaaggaggccattgccacatcagaagagctgggccaggac
ctggagcacgtgcagctcctgcagaagaagtttgaggagttccagacggatctggctgcc
catgaggaacgtgtgaatgaggtgaaccagcttgcagctaagctgatccaggaatcccat
ccagagggagagctcattgtgcgcaagcaggacgaggtcaacgcagcctggcagcgcctg
aagggcctggcccaacagaggcagggcaagctgtttggagctgctgaggtgcagcgtttc
aacagggatgtggatgaaaccatcagctggatcaaggagaaggagcagctgatggggtct
gatgactttgggcgtgacctggccagtgttcaggctctgctgcgcaaacatgagggcctg
gagagagacctggcagctttggaagataaggtcaaaactttgggtggtgacgctgagcac
ctgcagcagacacatccccagaacgcttcgcagatccatttgaaaaaggacgaacttatc
accaactgggaacagattcgcactctgtctactgagcgccgtgcccgtctgaacgactcc
taccagctgcagcgtttcactgctgactttagggatctgactagctgggtaactgagatg
aaggctctgatcaatgctgatgaactggccaatgatgtggctggagctgaggccctgtta
gaccgccatcaggagcacaagggagagattgacgctcacgaggacagttttagaactaca
gatgaagctggccaggccttgctcagtgcaggacactatgcctctgacgaggtgaaggaa
aagcttggtgtccttgctgcagaaaaggagtctctgctggagttgtgggaggttcgcagg
cagcagtatgagcagtgcatggacctgcagctcttttacagggatactgagcaagttgac
aactggatgagcaagcaagaggctttcctcctgaatgaagaccttggtgactccctggac
agtgtagaggcactgcttaaaaaacatgaagattttgagaagtcgctgagtgctcaagaa
gagaagatcactgctttggatgaatttgctaccaaactgattcagaacaaccactatgcc
aaagaggatgtggctacacgcagagatgctctactcagccgccgcaatgccctgcatgac
cgtgctcagtctcgtcgtgctgccttggaggactccttccacctccagcagttcttcagg
gactctgatgagcttaagagctggatcaatgaaaagatgaagactgctactgatgaggct
tacaaggacccctccaacctgcagggcaaggtgcagaaacaccaggcctttgaagctgag
ctgtctgctaaccagagccgaatcgatgccttgcagaagtcaggccaggagctgctggat
ggaaagcattatgcctcaactgaggtttctggtcacatggaagaagtcagctctcagtgg
aaaaaactgctggaggctactgagctcaaaggcatcaagctgcgtgaagccaaccagcag
cagcagttcaacagaaatgtagaggacatagagctgtggctgtatgaagtggagggtcac
ctggcttcagatgattatggaaaagacctgacaagtgttcagaacctacaaaagaaacat
gcactgctggaggctgatgtggcagctcaccaggatcggattgatggcataacaatccag
gcccgccagttccaggaggctggccactttgatgctgacaacatccgcaagaagcaagag
gccttggtggttcggtatgaagctctgcgtgaacccatggctgcacgcaagcagaagctg
tcagactctctaaggctgcagcaactgttcagagatattgaagatgaggagacctggatc
cgtgagaaagagcccatcgctgcctctactaacagaggcaaagacctgattggtgtccag
aacttgctgaagaagcaccaggctctgcaggctgaaatcacaggtcacgagcctcgcatt
aaggctgtcacccagaagggagaagctatggtggaggaaggtcactttgctggtgaggat
gtgaaggctaagctggctgagctgcatgggcgttgggacactctgaaggccaaggcctcc
cagaggagacaggaccttgaggactctctgcaggcccagcaatactttgctgatgctaac
gaggccgagtcttggatgagggagaaggaacccattgttgggagcacagactacggcaaa
gacgaggactcagctgaggctctgctaaagaagcacgaagccctgatgtctgacctgagc
gcttacggcagcagtatccaggccctgaaggagcaggcccagtcctgcaggcaacaagtt
gccccaaccgatgatgagaccgggaaggagctggtcctggcactgtatgactatcaggag
aagagcccacgtgaagttaccatgaagaaaggagacattctcactctcctcaacagcact
aacaaggactggtggaaagtggaggtgaatgatcgccagggcttcgttcctgctgcttat
gtgaagaagctcgaccccacccaatcctcttccagggagaacctgctggatgaacatggc
agcattgcactccgccaggaccagattgaaaatcagcttgtcaccaaggaggcctgcagc
gtgtctgtgcgcatgaagcaggtggaagagctatatggtactctgttagagttgggggag
aagcgcaaggacatgcttgagaaaagctgcaagaagtttatgttattccgtgaggccaac
gagctccagcagtggattcatgagaaggagagcaccctcactaatgaggagatgggctct
gatctggagcaggttgaggttctacagaagaagtttgatgacttccagaaggacctcaag
gccaatgagtctcgtctgagggatatcaacaaagtggcttcagagctggagtctgaaggc
cttatggctgaggaggcccccatggttcaggctcagcaacaagagctgcttggtgctgct
cctggcaaggatgaagcggattctaagactgcatctccatggaagaatatacgcttggct
gttcaaacaacggctaactttaatacaatcaaggagctgaacaaccgctggcgatccctg
caacagctggctgaagaaaggagcaacatgttggggagtgcacatgaggtgcagcggttc
cacagggatgctgatgagactaaagagtggattgaggagaagaaccaggccttgaacact
gacaactacggtcacgacttggccagcgtccaggctttgcagcgcaaacacgagggcttt
gagagagacctggctgccctgggggataaggttaactctctcggagagacagcagagcgc
ttgatccagtctcaccctgaatcggtggatgacatccaggagaaatgcacagagctgaac
actgcttggagcagcctggtgggacgtgctgaccagcgcaaagacaagcttggcaattct
catgacctgcagcgtttcctctctgacttcagagatctcatgtcctggatcaatggcatc
cgaggattagtctcctcagaggagctggctaaggatgtgactggagccgaggccctttta
gaaagacaccaggaacaccgtacagagattgatgctcgggctggtactttccaggcattt
gaacagttcggacagcagctgctggctcgaggccactatgctagtcctgagattcagcaa
aaactcgaggctttagaccgtgagcgtgctgatctggagaaggcctgggtgcagcgccgc
atgatgttggatcagtgcctagaacttcagctttttaacagagactgtgagcaggctgag
aactggatggcagctcgtgaagccttcctcgccagtgatgacaagggtgactccctggac
agtgtggaggccctcattaagaaacatgaagactttgacaaggccattaacgttcaggag
gagaagattgctgctttgcagtcttttgctgaccagttgattggagccgaccattacgcc
aaacctgagattcttaaccggcgcaatgaagttcttgacaggtggcgccggctgaaggca
cagatgatcgaaaagcgctccaagttgggtgaatcccagaccctgcagcagtttagtcgt
gatgtggacgaaattgaggcttggatcagtgagaaactacagactgcaactgatgagtct
tacaaggatcccaccaacatccagctgtccaagctgctgagtaagcatcagaaacatcag
gcgtttgaggccgagctgcacgctaatgcagacagaatccgtggagtcattgacacaggc
aacgccctgatccagagaggagcctgtgccggcagcgaggatgcagtcaaggcacgtctc
ggtgctttggatgaacagtggcagttcctcgtcaacaaatctgcagaaaagagccagaaa
ctcaaagaggccaacaagcagcagaacttcaatactggcatcaaggactttgacttctgg
ctctctgaggtggaagcccttcttgcctctgaggattatggaaaggatctggcttcagtc
aacaatctgctgaagaaacaccagctgctggaggctgatatttctgcccatgaggatcgt
ctgaaggatctgaacggccaggctgacagcctgatggccagcaatgctttcgatactact
caggtgaaggacaagcgtgatgctgtcaacggccgcttcgctaaaatcaagaatatggca
gccagtcgtcgcgctaaactaaacgaatcccaccgcctgcaccagtttttcagagacctg
gatgatgaagagtcttggatcaaagagaagaagctacttgtgagttcggaggactatgga
cgtgatttgacaggagtacagaatctgaggaagaaacacaagaggctggaggctgagctt
ggagcccacgagccagccatccagtctgtgctggacactgggaagaagttgtcagatgac
aacactattggccaggaggagatccagcagaggctcgcccagtttgttgaccactggaaa
gaacttaaggacttatctggagcgagaggaaagaggcttgaggaatcgttggagtaccag
cagtttgtggcgaatgtggaagaagaagaagcctggattaatgagaagttgaatctagtg
ggaagtgaggactacggagacacacttgctgctgtgcagggtttactgaaaaagcatgaa
gcatttgagactgatttcactgtacacagagacagagtgaatgatgtgtgcgctaacgga
gaggagctcatcaagaagaacaatcatcatgtggacaacatcagtgccaagatgtcagct
ctgcgaggaaaagtgtctgagctggagagggctgcagcacagaggaaggccaagctggac
gaaaactctgccttcctgcagttcaactggaaggccgacgttgtggaatcctggatcggt
gagaaagaaaacagcctgaagactgacgactatggtagagacctgtcctctgtgcagacg
ctgcttaccaaacaggagacatttgatgctggcctgcaggccttccagcaggagggcatc
accaatattacaactctgaaagaccagctgctggctgccaaacacgtccagtcaaaagcc
attgaagctcgtcacgctgccctaatgaaacgctggaatcagctactgtcgaactctgct
gcacgcaagaagaagcttctggaagcccaggaacatttcagaaaggtcgaagacttgttc
ttgacatttgctaaaaaggcgtcagcctttaacagctggtttgagaatgctgaggaggat
ttgacagaccctgtgaggtgcaactctctggaggagatcaaagccctgcgtgaagcccac
gaggctttccgttcctcactgagctcagctcaagctgactttaaccaactggcagaactg
gaccaacagatcaagagctaccaggtggtgtccaacccctacacctggttcaccatggag
gccctggaggagacctggaggaacctgcagaagatcatcaaggagcgtgagctagagctg
cagaaggagcagaggaggcaggaggaaaacgacaagctgcgtcaggagttcgcgcagcac
gccaacgccttccaccagtggctacaagagaccaggacatatcttctggatgggtcatgt
atggtggaagagtctggtacccttgaatcccaactggaggccaccaagcgtaagcaccag
gaaatccgtgccatgcgcagccagctgaagaagattgaggacttgggtgcagctatggaa
gaggcactgatcttggacaataagtatacagagcatagtacagtgggcttggcccagcag
tgggaccaattggaccaactgggaatgaggatgcagcacaacctggaacaacagatacag
gccagaaataccactggagtgacagaagaggctctgaaggaattcagtatgatgttcaaa
cactttgacaaagagaagtctggccgtctgaaccaccaagagttcaagtcatgtctccgc
tcactgggctatgatttgcccatggtggaagagggagaaccagatcctgagtttgaggcc
atactcgacacagtggatcccaatagggatggaaacgtgtcgctgcaggagtacatggcg
ttcatgatcagccgtgaaactgagaatgtcaagtctagtgaggagatcgagagcgccttc
cgagccctcagcgctgaaaacaaaccctacgtcactaaagaggagctctaccagaacctg
actaaagagcaggcagactactgtctgtcgcacatgaagccctacctcgacagcaagggc
cgcgagctgccgtcagctttcgactttgtcgaattcactcgctcgctctttgtcaactga
DBGET
integrated database retrieval system
