Oreochromis niloticus (Nile tilapia): 100702294
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Entry
100702294 CDS
T06104
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100702294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
100702294
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100702294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
DUF3859
Motif
Other DBs
NCBI-GeneID:
100702294
NCBI-ProteinID:
XP_003452675
Ensembl:
ENSONIG00000011656
LinkDB
All DBs
Position
LG12:13347339..13381510
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AA seq
363 aa
AA seq
DB search
MALTVNLIGPSPWGFRIHGGRDFKKAITVSKVNEGGKAEQAALQAGDIILEINGENTADM
LNAEAQTKIKNSKTSLQLVVERPETPGLGQTNGTPEQLIGRFKDTVKLNQDENQNYREYT
ISSPVSRSPGPYSTDRPASPDTRMEKVTPTINKSFQLRSRSPEERNTRLSGLVSQDVSPS
DYRNNSVSNRTPPGRFSPQSPTERDVPVSPHLSSPSSDFAMQRFDTDSEVYKMIQENRES
RNPPRQSNTFKMLQEVLEADEKEAALRFPGNLSPNAPKATTSVGGTSKYHTCERCDTKIV
SQAVRISDDRFRHPECYTCTDCGLNLSMRGHFWIGDVMYCEKHAKERYQGPGSSPQATVS
PHH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcactaacagtgaacctgattggcccttcaccatggggcttcagaatacatggcgga
cgagatttcaagaaggctataactgtatcaaaggtcaatgagggcggcaaggcagagcag
gcagccctgcaagctggtgacattattttggagatcaatggagaaaacacggctgatatg
ctgaatgcagaggcccagaccaagatcaagaactccaagacctctctgcagctggtggtg
gagagacctgaaactcccggccttggacaaaccaacggcactcctgaacagctcattgga
cgtttcaaggacacagtaaaactgaatcaagatgagaatcaaaactatagagagtacacc
atctccagccctgtgtcacgatctccaggaccgtactcaacagatcgtcctgccagcccc
gatacaaggatggagaaggtgacaccaaccatcaacaagagttttcagctgcgctcaagg
tcaccagaggagagaaatacgaggctgtcaggactcgtgtcacaggacgtctcgccttca
gactacagaaacaactctgtgtccaacagaactccaccaggacgcttctcaccccaaagt
cccactgagcgtgacgtaccagtgtcacctcatctcagcagtcccagttctgattttgcc
atgcagaggttcgacacagactcagaggtgtacaagatgatccaggagaacagggagtcc
cgcaatccacctcgtcaatccaacacctttaagatgctgcaagaggtcctggaggctgat
gaaaaagaggcagctctgaggtttccaggaaatctttcaccaaatgcccccaaagcaacc
acatcagtgggaggaaccagcaaataccacacctgcgagaggtgtgataccaaaattgtc
tcacaggccgtgcgcatcagcgacgatcgattccgccaccccgagtgctacacgtgcaca
gattgcggtcttaacctgagtatgcgaggtcacttttggattggagatgtgatgtactgt
gagaagcacgccaaagaaaggtaccagggcccgggcagctccccccaagccaccgtgtcc
cctcaccactga
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