Oreochromis niloticus (Nile tilapia): 100702346
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Entry
100702346 CDS
T06104
Symbol
irf8
Name
(RefSeq) interferon regulatory factor 8
KO
K10155
interferon regulatory factor 8
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100702346 (irf8)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100702346 (irf8)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
100702346
NCBI-ProteinID:
XP_005467184
Ensembl:
ENSONIG00000005631
UniProt:
I3JDZ7
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Position
LG1:complement(23255881..23259733)
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AA seq
420 aa
AA seq
DB search
MSNTGGRRLKQWLMEQIQSAQYSGLLWEDESRTMFRIPWKHAGKQDYNQEVDASIFKAWA
VFKGKYKEGDKAEPATWKTRLRCALNKSPDFEEVTERSQLDISEPYKVYRIVPEEEQKHG
KSSVMAVTATTSSGEITDMDCNPELEELIKEEESCSIQASPEYWSQGSVNAFPLHQEPLP
SSSLSSALCQMMISFYYGGKLMHSTLVTHPEGCRISPQQPLGRGALYSSDSMQSVYFPPA
ELIEFERQRYVTRKLLGHLERGVLVRANQDGIYIKRLCQSRVFWSGLGDVGSQYGSMPGK
LDRDAVVKIFDTGRFLQALQLYQEGQIPAPDPTVTLCFGEELHDHNSAKNKLIIVQITSV
NCQHVLETMNMRRAQPYCNNPNLEMSDDVATDQMARIYQDLCSYSAPQRPTYRDNMPITA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacgggaggtcggaggctgaagcagtggctgatggagcagatccaaagtgcg
cagtattctggactcctgtgggaggatgaaagccgcactatgttccgaattccatggaaa
cacgcaggaaaacaggattacaaccaagaagtcgacgcatccatttttaaggcctgggct
gtgtttaaaggcaagtataaggagggggacaaggctgagcctgcaacatggaagaccaga
cttcgctgtgccctgaataaaagccctgacttcgaggaggtgactgagaggtcacagctt
gatatatctgagccttataaagtgtaccgcattgttccagaagaagagcaaaaacacggc
aaaagttcagtgatggctgtgacagctaccaccagctctggtgagatcacagatatggac
tgcaaccccgagctagaagagctcattaaagaggaggaaagctgtagcatccaagccagt
ccagaatattggtcccagggcagtgtcaatgctttcccactgcatcaagaacctttgcca
tcgagcagtctcagttcagccctctgccaaatgatgatcagtttttactatggaggaaag
ctaatgcactccacactggtgactcatcctgaaggatgccgaatctctccgcaacaaccc
ctgggtcggggtgccctctacagttcagacagcatgcagagtgtttatttcccacccgct
gaactcattgagtttgaacggcagcgctatgtcacgcgcaagcttctgggccacctggag
agaggtgtattggtccgtgcaaaccaagacggcatctacatcaaaaggctgtgccagagc
cgtgtcttctggagcggattgggagatgtgggctcgcaatatggctcaatgcctggcaaa
cttgacagggatgctgttgtcaagatctttgatacaggaaggtttcttcaagctctacag
ctgtaccaggagggtcagattcctgctcctgatccaacagtgactctgtgttttggagaa
gagttgcatgatcacaacagtgccaaaaacaaactgatcatcgtccagatcacttcagtg
aactgccagcacgtgcttgagacaatgaacatgcgtcgtgcccagccttactgcaacaac
ccaaacctagagatgtctgatgatgtggccactgaccagatggctcgcatctaccaggat
ctgtgcagctacagtgctcctcaaaggccaacttacagggacaacatgccaatcactgcc
taa
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