KEGG   Oreochromis niloticus (Nile tilapia): 100702367
Entry
100702367         CDS       T06104                                 
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:onl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100702367 (snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:onl04131]
    100702367 (snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100702367 (snf8)
Membrane trafficking [BR:onl04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    100702367 (snf8)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100702367 (snf8)
SSDB
Motif
Pfam: EAP30 MarR_2 AbiEi_4 RPA_interact_C Sigma70_r1_1 MarR DUF4896
Other DBs
NCBI-GeneID: 100702367
NCBI-ProteinID: XP_005453809
Ensembl: ENSONIG00000018202
UniProt: I3KP81
LinkDB
Position
LG8:5275118..5280708
AA seq 257 aa
MRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKTHLEEFASKHKQEIRKN
PQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITL
DELHQRVLKGRGKYAQDVSQDDLVRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDHT
VVLQLAEKKGYVTVSEIKDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEAQYWLPALFS
ELTSRDVTPEEANQMTP
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcggagaggtgtcggcgccggggcgatcgccaaaaagaagctggctgaggccaaatac
aaagaaagaggaactgttctggctgaggatcaaatagtgcagatgtccaagcagctggaa
actttcaagacccacctggaagaatttgccagcaaacataaacaagagatccgcaagaac
ccacagttcagggtccagtttcaggaaatgtgtgccaccatcggcgttgacccacttgca
tctggtaaagggttttggtctgagatgctcggagtcggtgacttctactatgagctcggt
gtgcagatcattgaagtgtgccttgccctgaaacatagaaatggagggctgattactctg
gatgagctccatcagagagtactgaaaggacgcggtaaatacgctcaggacgtgagccag
gacgacttggtgagagccataaagaaactgaaggtgatggggaatgggtttgggatgatt
cccgttggtggttcttacttggtccagtcagtcccggctgagctcaacatggaccacact
gtggttcttcagctggctgagaaaaagggatacgtcacagtgagtgagatcaaggacagt
ctaaaatgggagaaggagcgagcgtgtcacgtgctggatcacctgctcaaggaaggcctg
gcttggctggactctcaggcagctggagaggcacagtactggctgccagcgctcttctct
gagctgacttcccgtgacgtcacaccggaggaggccaatcagatgacaccttaa

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