Oreochromis niloticus (Nile tilapia): 100702418
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Entry
100702418 CDS
T06104
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100702418 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100702418 (gspt1)
03012 Translation factors [BR:
onl03012
]
100702418 (gspt1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100702418 (gspt1)
Translation factors [BR:
onl03012
]
Eukaryotic type
Release factors
100702418 (gspt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100702418
NCBI-ProteinID:
XP_003438755
Ensembl:
ENSONIG00000019754
UniProt:
A0A669D0Y9
LinkDB
All DBs
Position
LG8:complement(21901561..21911822)
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AA seq
587 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGTPDPAASMEVSETVAPVENGSTEADMPTEEETWEQKEEPGGDEGGGGQEDLGSG
GTCAEEGGAAGKEDEEMMEEEEEEMPLPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGG
QIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKK
HFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGV
KHLIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDP
VPECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQL
VMMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRT
FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQV
CIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaagaggatgccgaggcccct
gctgccgcggcaggactcccaaccgccttcgccgcccttaacgtaaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccaagcttccttcaagccagcgctgtggaa
atgccggcttcagatggtacccctgatccagctgccagtatggaggtgtcagaaacagtc
gctccagtggagaatggaagcacagaggcagacatgcccacagaggaagagacgtgggag
cagaaggaggagcccgggggagacgaaggaggtggcggacaggaggatctggggtctggg
gggacctgcgcggaggagggaggcgcagcagggaaagaggacgaggagatgatggaggag
gaagaggaggagatgcccctgcccaaagtggctccggcaccaccagacgctcctaagaaa
gaacacgttaacgtggtcttcattggtcatgttgatgccgggaaatcgacgatcggagga
cagatcatgtacttaactggaatggtggacaaacgaaccctggagaaatatgaaagagaa
gcgaaagaaaaaaacagggagacatggtacctgtcgtgggctctggacacaaatcaggag
gagagagacaaagggaagacggtcgaggtaggaagggcttacttcgagacggagaaaaaa
cacttcaccatcctcgatgcccccggacacaagagctttgtccccaacatgatcggtggg
gcgtcacaagctgacctggcagtcctggtgatttcggcaagaaagggggagtttgagacg
ggattcgaaaagggtgggcagacgcgggagcatgccatgctggctaaaacggcaggagtt
aaacatctcattgtcctcatcaacaagatggatgaccccactgtcaactggagcctagaa
aggtatgaggagtgtaaggagaagctggtgccatttctaaagaaggtgggcttcaaccct
aagaaggacatccactttatgccttgctctggactcacaggtgccaacctcaaggaccct
gtacccgaatgcccctggtacacgggtttgccatttattgcccacctggacagtttgcca
aacttcaccagatcaagtgacggacctgtcagactacctatcgtagacaaatacaaggat
atgggtactgttatccttggaaagctggaatccggatccattagtaaagcccagcagctg
gtcatgatgccaaacaggcacacggtggaggttttgagcctgctgagtgacgatgtggag
acggacgacgcaagtcctggggagaacctgaagttgcggctgaagggcatagaggaggaa
gaaatccttcctggttttatcctctgtagccccgacaacctctgccactctggccgcacc
tttgatgcgcagatcgtcatcatcgagcacaaatccatcatttgtcctggttacaatgca
gtccttcacatccacacctgcatcgaagaagtgcaaattacagccttaatctgtctggtg
gacaagaagacgggagagaaaagcaaaacacgaccacgctttgtgaagcaggaccaggtt
tgtatcgccaggctccgggcagcaggagtcatctgcttagagaccttcaaagacttccct
cagatggggcgattcacactgagagacgaaggcaaaacaatcgccattggcaaagtgctg
aagctggtgccagaaaaggactaa
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