Oreochromis niloticus (Nile tilapia): 100702461
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Entry
100702461 CDS
T06104
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100702461 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100702461 (dhx8)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100702461 (dhx8)
Spliceosome [BR:
onl03041
]
Complex C
Other components
Step II factors
100702461 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
Flavi_DEAD
TsaE
PhoH
Sigma54_activ_2
ABC_tran
RSRP
Motif
Other DBs
NCBI-GeneID:
100702461
NCBI-ProteinID:
XP_013128884
Ensembl:
ENSONIG00000018248
UniProt:
I3KPD5
LinkDB
All DBs
Position
LG8:6137935..6147793
Genome browser
AA seq
1213 aa
AA seq
DB search
MADIGVDELSQLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKQQSFDGFKALLLEN
GAEFTDSLISNLLRLIQTMRPPSKASTSKASESVAKPKSEKEKLRELFPALCRPNEPAPK
ALLDEDDVKVAADAMKELEMFMPSVSGTDSKGSKNRSEKNRRSRSRSREKDRHRDRDRDR
EKDRKRRHRSRSYSRSRSRSRDRDRHRDRDRDRGKRRDKSSRWSERSPSPRKDQERESDR
WRDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVAN
VADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGGEEISMRNPD
RPSNLNLGHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILP
KVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERR
ELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFGGNK
ASYGKKTQLSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY
TARGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLL
RECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQ
YFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEID
TACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLT
IDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERA
YRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGAL
DDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQAL
ADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD
RHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPE
WVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEE
PNAWRISRAFRRR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatcggagtcgacgagctatcgcagctcgaatatctgtctttagtgtcgaaa
gtctgcacggagcttgacaaccatctgggaataaatgacaaagatttagctgaatttgtc
atcagccttgccgaaaaacaacagagctttgatggattcaaagcacttttactcgaaaat
ggagccgaattcacagattctctcatcagtaatctgctcaggctcattcagacgatgcga
cctccatccaaagcatctacaagtaaagcatccgagtccgtggctaagccgaagtcagaa
aaggaaaagctgagggagctgtttcctgcactgtgtagaccaaatgagccggcaccgaag
gctctgctggatgaagatgatgtaaaagtagcagctgatgccatgaaggaactggaaatg
ttcatgcccagtgtcagcgggacagactccaaagggagcaagaacagatcagaaaaaaac
aggcgaagtcgcagcagaagcagagaaaaagacagacacagagatcgagacagagatcgg
gaaaaggaccgaaagagacggcatcgttcccgatcctattccagatccaggtcacgctcc
agagaccgtgatcggcatagagatagagatagagaccgtggcaagagaagagacaaatct
tcccgctggtctgagcgctcacctagtccgagaaaagaccaagagagagagtctgaccgc
tggagggacaaacatgtggatcgccctccacctgaggagccttctgttggtgatatctac
aatggaaaggttaccagcatcatgcagtttggatgctttgttcaacttgagggactcagg
aagcgatgggagggtctggtccacatttctgagctgcgcagggagggccgtgtggccaac
gtggccgacgttgttagcaaaggccaaagagtcaaagtcaaggtgctctcattcacaggg
tccaagaccagcctcagtatgaaggatgtagaccaggagacgggagaagacctgaacccc
aacaggaggaggaacgtcggccccgacggaggagaggagatctccatgaggaatcctgat
cggccgagcaacctgaacctcggccacgcgccggagctggaacaggatgacacactggag
cgcaagaggctcaccaaaatctcagacccagagaagtgggagatcaaacagatgattgct
gccaatgttttgtccaaagaagaatttcctgattttgatgatgagacaggcatccttcct
aaagttgatgatgaagaggatgaagacttggaaattgagctggttgaagaggaaccaccg
tttctgagaggccacacaaagcaaagcatggacatgagcccagtcaagattgtcaagaat
ccagatggctcgctgtcccaggcagccatgatgcagagtgctctggcaaaagagagacga
gaactgaagcaggcggcgcgggaagcagagatggactccatccccatggggctgaacaaa
cactgggttgacccgctgccagacgctgatggtcgacagattgccgctaacatgagaggc
attggcatgatgcccaatgacatcccagagtggaagaaacatgcgtttggagggaacaag
gcatcctatggaaagaagactcaactctctatcttggagcagagagagagcttacccatc
tacaagctgaaagagcagctcgttcaggctgttcacgacaaccagatcctgatcgtcatt
ggagagacgggatctggaaagaccacacagatcacccagtacctggcagaggctggttac
acagccagggggaagattggctgtacgcagccccgtcgtgtggctgccatgtcagtggct
aagagagtttctgaggagtacggttgttgtctgggacaagaggtgggctacaccatccgt
tttgaggattgcacaagtcctgagactgtgatcaagtacatgacagacggtatgctgttg
agagagtgtttgattgactccgagttgggccagtacgccattatcatgttagatgaagct
catgagaggacaatccacactgatgttctttttggcctcctcaagaagactgtacaaaag
cgcacagacatgaagctgattgtgacatcagctacactggatgctgtgaagttctctcag
tatttctatgaagcacccatcttcaccatccccggcagaacgtatccagtagaggttctt
tacaccaaagaacctgagacggactacctggatgccagcctcatcactgtcatgcagatt
catctgactgagcctccaggagacatcctggtgtttttaactggacaggaggagatcgac
acagcctgtgagatcctttatgagagaatgaagtcacttgggcctgatgttcctgaactg
atcattctgccagtttattctgccctgcccagtgagatgcagaccagaatctttgaccca
gcacccccaggcagcagaaaggttgtcatcgccacaaacattgcagagacctctctgacc
atcgatggaatctattatgttgtagatccaggctttgtcaagcagaaagtgtacaactct
aagactggcattgatcagctggtggtgacgccaatctcacaggctcaggctaagcagagg
gcaggtcgtgccggcagaacaggccctggaaagtgttacaggctgtacactgagagagcc
tacagagatgagatgctgacaaccaatgtacccgaaatccagagaaccaacttggccagc
actgtgctgtcgctgaaggcaatgggcatcaatgatctgctgtcttttgacttcatggac
gctcctcctatggagactctgatcacagccatggagcagctctacaccttaggagctctg
gacgatgaaggcttactcacacgactgggtcgaaggatggctgaattccctctggagccc
atgttgtgtaagatgctgatcatgtccgtccatctgggctgcagcgaagagatgctcaca
atcgtgtcgatgctgtctgtgcagaatgtcttttacaggcctaaggacaagcaggccttg
gctgaccagaagaaggcaaagttccaccaacctgagggcgatcacctcaccctgctagct
gtctacaactcctggaagaacaacaagttctccaacccctggtgctacgagaacttcatc
caggctcgctccctgcgcagagcccaggatatccgcaaacagatgctggggatcatggac
agacataaactggatgtagtatcttgtggtaaagccactgtgcgagtccagaaagccatc
tgcagtggtttcttcaggaatgcagccaaaaaggatcctcaggagggctacagaaccctg
atagaccagcaagttgtttacatccacccctccagtgctctgttcaaccggcagcctgag
tgggttgtgtaccacgagctggtgctgactaccaaggagtacatgcgtgaggtgaccacc
atcgaccctcgctggctggtggagttcgcacctgccttctttaaagtgtccgaccccacc
cgcctcagcaagcagaagaaacaacagcgcctcgagcccctctacaaccgttacgaagag
cccaacgcttggagaatctcacgcgccttcagacgccgataa
DBGET
integrated database retrieval system
