Oreochromis niloticus (Nile tilapia): 100702601
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Entry
100702601 CDS
T06104
Symbol
ifne
Name
(RefSeq) interferon epsilon
KO
K05442
interferon epsilon
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
onl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100702601 (ifne)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100702601 (ifne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100702601 (ifne)
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Interferons
100702601 (ifne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Calmod_bind_M
DUF5446
Motif
Other DBs
NCBI-GeneID:
100702601
NCBI-ProteinID:
XP_019218246
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All DBs
Position
LG8:6895209..6911872
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AA seq
160 aa
AA seq
DB search
MSQFSLYNEIALGRLHMMITNTTKDAEIEHNVAFPNRLYRQTSKATAEDKLAFTIQILND
LFALFKKNRSSAPWEENTVENFLNIVNKQTEELRSCIGSHSNTTQKGQQLSFRREMYFER
LLNEILKKNGYSAEAWEKIRNITQAHLRQCEFLISPRTAH
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattcagtctgtacaacgaaatagctttaggtcgacttcatatgatgattact
aacaccactaaggatgctgaaattgagcacaacgtagctttccctaatcgactgtatcgc
cagacgtccaaagcaacagctgaggataaactggctttcacaattcagattctgaatgac
ctgtttgccctgtttaagaagaatcgcagctctgcaccatgggaggagaacacagtggag
aactttctcaatattgtgaacaaacagactgaagagcttcgctcctgtattggaagccac
agcaatacgacacagaaggggcaacagctgtcttttaggagagaaatgtatttcgagaga
ctcttaaatgaaatcctaaagaaaaatggttacagtgctgaagcctgggagaagatcagg
aacataacacaagcccatctgagacaatgtgaatttctcatatctccgagaactgcccac
tga
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