Oreochromis niloticus (Nile tilapia): 100702646
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Entry
100702646 CDS
T06104
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100702646
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100702646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100702646
NCBI-ProteinID:
XP_005455344
Ensembl:
ENSONIG00000016235
UniProt:
I3KH46
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All DBs
Position
LG11:complement(26407380..26416598)
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AA seq
632 aa
AA seq
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MDEALPSLSSVSDSLEADSEEFQLRVDFFRKLGYTPSEVMAALRKLGLSTDTNAVLGELV
RNRTSSVPCISSSDSDERSTSQNDSLQPPSWALGSCKNTTQLWDQNKPDEELRPVVIDGS
NVAMSHGNKEVFSCRGIQLAVNFFLDRGHTSITVFVPSWRKELPRADAPLTDQHILLELE
KRKIVVFTPSRRVGGKRVVCYDDRFIIKLAYESDGIIVSNDTYRDLQAERPEWKKCIEER
LLMYSFVNDKFMPPDDPLGRHGPSLGNFLRKKPRPTEQRRQLCPYEKKCTYGMKCKFYHP
ERVNQPYLSLADELREKAQISTVKEERNARLSPRQLQSDPALAQNVYFHPRDSNTELKRD
QQTSSPPSQVSENKLLYWEDPRHNPNHMPCSVTGTQCQKEWPGLHLMPNHYYANMSQEYL
DSGLGSFESQYSDISHSLSNSKKLRPQYQSAPPGATNSPVHLEKNNINQPCKCCSHAVPS
TVHHQLHGNMDSQAQPQYSTYHPNALTPTASHQRSLPSHFPYSGGTHVQQHYWSDPFQGL
PQASRPNSLPSSIRSSHYHNSCCSSNSHQYYSRGQQPSSAAFDSQRLELRNNLKAIFNPH
LVDTVMDMFPNLMNPEKLAAEILKLKAQRDLF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggctcttcccagcctgagctcagtttcagactctctggaagcagacagtgag
gagttccagctcagagtggacttcttcaggaagttgggttacaccccatcagaggtcatg
gctgctttgaggaagctgggcttaagcacagacactaatgcggtgctaggagagctcgtt
aggaacagaaccagcagtgtaccttgcatttccagctctgacagtgacgagaggagcaca
agccaaaacgactccctgcagcctcccagttgggctcttgggtcctgcaaaaacacaacg
cagctgtgggaccaaaacaaaccggacgaagaattgaggcctgttgttattgacggcagc
aatgttgccatgagtcatggcaacaaggaagtattctcatgccgagggattcagctggcg
gtgaacttcttccttgacagaggtcatactagcattactgtgtttgttcccagctggcgc
aaagagctgcccagagctgatgctcccctgacagatcaacacattctgctggagcttgaa
aaaaggaaaatcgttgtctttactccatcacgccgtgttgggggcaagcgtgtggtttgc
tatgatgaccgctttattatcaaattggcgtatgagtccgatggaataatcgtatccaat
gacacctaccgagacctccaagcagaaagacctgagtggaagaaatgcattgaggagagg
ctgctcatgtactcctttgtgaatgacaagttcatgcccccagatgaccctttgggtcgc
cacggccccagccttggcaatttccttcggaaaaagcctcgtcctacggagcaaaggaga
caactctgtccatatgaaaaaaagtgcacctatggcatgaagtgtaagttctaccatcct
gagcgggtaaaccaaccctatctgtctttggctgatgaactgagagagaaagcccagatt
tctactgtaaaagaagagagaaatgccagattgtcacccagacagcttcagtcggatccc
gcacttgctcaaaatgtctattttcatcctcgagactccaacacagagctcaaaagagac
cagcagacttcctcacccccttctcaggttagtgaaaataagctgctgtactgggaggat
ccgagacacaatccaaatcacatgccgtgttctgtaacaggaacccagtgtcagaaagag
tggcctgggttgcacttgatgccaaatcattactatgccaacatgtctcaagagtacctg
gattcaggccttggctcttttgagagtcagtactctgatatttcgcattccctcagcaac
tcaaagaagctcaggccgcagtatcagagtgctcctcctggagccacaaattctccagta
catttagagaaaaataacatcaaccagccttgcaagtgctgttctcatgcagtgccctcg
acagttcaccatcaacttcatggaaacatggactctcaggcacaacctcaatacagcacc
tatcacccaaatgccctcacacccactgcatcccaccagcgcagcctccccagccatttc
ccgtacagtggaggcacccatgttcagcagcattactggtcagatccctttcaggggtta
ccacaagccagcagaccgaatagtctcccttcttcaattcgttcttcacactaccataat
tcttgctgctctagcaacagtcatcagtactattcaaggggacaacaaccatcttctgct
gcatttgactcacaaaggttagaactccgcaacaacctgaaagccatcttcaacccacat
ctggtggatactgtcatggacatgtttccaaatctgatgaatcctgagaaactagctgca
gagatactgaaactaaaagcccaaagagatcttttctga
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