Oreochromis niloticus (Nile tilapia): 100702749
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Entry
100702749 CDS
T06104
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100702749 (msh4)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100702749 (msh4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100702749
NCBI-ProteinID:
XP_005477028
Ensembl:
ENSONIG00000020152
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All DBs
Position
LG19:complement(11109766..11117044)
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AA seq
904 aa
AA seq
DB search
MFASSTEEVTDGYASASEQSWGILPKDKSGQDQTFSCVTSASSKQSSNEGSTSSRHGPSS
GTASGQLPSSFRIDKPASLLLSSCTESSSFHSRGGTPRHRRTPGSAGAPGTSYSSGSTNT
GASVIVVVVEGRGLARGEIGMASLDLKCPELVLSQFADTGTYAKVITKIHILVPVEILMP
DTASEKGKGTKLFNLITENFPGVPFTPVQRKYFNEKKGLEYIQQLCAPEFSTVVMEVQAK
YYCLAAAAALLKYLEFLQNSVYVAKSLKVSFKGSEQTAMIDSASASNLELVVNNRNYRSD
HTLFGVLNHTKTPGGARRLRSNILEPLVDVETINTRLDTIQELLEDEELFFGLKNAISHF
LDIDQLLSVLVQIPKKETFQVAEAKITHIIQLKYTLDLVPRLRMLLKNRNTALLKAYSTT
LEDNRFDMILEQIKTVINYDTTYLKDSFKMRTQKCYAVRPNINKFLDIARKAYTEIVDDI
AELVNQLGEKYGLPMRTSFSTARGFFIQLKLEGLTLPEGNLPSEFIKVTKHKNNYGFTTA
DLMKKNSRCEEALREIFHISYVVICQLLRTIHEHIHCLYKLSDALSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHAILERIGRQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYACFRVADQIFTRIGVDDDFETNSSTFMLEMKEISYIIHNASD
KSLIIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLFATHFLELCQLESLYPNVENQHM
QVQHTRSGDTGAESVVYTYLLNRGSSEERHYGLRAAEMTALPSSIIQEATTIASKVSQQF
LARHHTDPETQRQRAVYHLSTRLLQTARNSRLDPDSLRMYLKGLKKQYEAELQTAGQAVD
AEEQ
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccagcagcacagaggaggtaactgacggttatgcctcagcaagtgaacagtcg
tggggtatattacctaaggacaaaagtggacaggaccaaaccttttcttgtgtcacatca
gcttcatcaaagcaaagttcaaatgaaggcagtacgagctcccgccacggcccatcatct
ggaacggcctcaggtcaattaccgagcagctttagaatagacaagccagcttcattgctt
ctttcatcttgtacagagagctcatctttccacagccgtggaggaacaccaagacataga
aggaccccagggtctgctggggcacctggaacaagttactcatctggatccacaaacact
ggtgcttctgtgattgtggtagtagttgaaggacgcggcttagccagaggagagattggc
atggctagtctcgatttgaaatgcccagagcttgtactctctcagtttgcagatacagga
acatatgccaaggtcataaccaagattcacatcttggtcccagtggaaatactgatgcca
gacacagccagtgagaaggggaaaggaacaaagctgttcaatctcatcactgagaatttt
ccgggtgtacctttcactccagtgcaaaggaagtattttaatgagaagaaagggctggag
tacattcagcagctgtgtgccccagaattcagcactgttgttatggaagttcaagctaag
tattattgcctagcagctgcagctgctttgctgaagtatttagagttcctccagaactct
gtctacgttgccaagtcccttaaagtgagctttaaagggagtgagcagacagccatgatt
gactcagcatctgcctctaacttggaattggtggttaataatagaaactacaggagtgac
catactcttttcggggtactcaaccacacaaaaacacctggtggtgccagaaggttgcgc
tccaacattttggagcctctagttgatgtggaaacaatcaacactcgcctggacaccata
caagagctgctggaagatgaggagcttttctttggcttaaagaatgccataagtcacttc
cttgacattgaccagctgctctcagttctcgtccaaatcccaaagaaggaaacatttcaa
gttgctgaagcaaagattacacatatcattcagctgaaatacacactggacctggtgccg
aggttaaggatgctgctgaagaaccggaacacagctctgctcaaggcatatagtacaaca
cttgaagataacaggtttgacatgatcctggagcagatcaagactgtgatcaattatgac
acaacttacctcaaagatagctttaaaatgcgcacccagaagtgttacgctgtgcgcccg
aacatcaacaagtttctcgacattgcccggaaagcttacactgagatagtggacgacatt
gcagagcttgtgaaccagctgggggaaaaatacggcttgccaatgcgtactagcttcagc
acagctcgaggttttttcatccagctgaagcttgaaggactaaccttaccagaagggaac
ctcccctcagagttcatcaaagtaactaagcacaagaacaactatggcttcaccactgca
gacctgatgaagaagaacagccggtgtgaggaggccctgagggaaatctttcacatatct
tatgtggtaatatgccagctgctgagaactatccatgagcacattcactgcctttataag
ctctctgatgctctatccatgttggacatgttgctgtccctggcaaatgcatgcaccatc
tcagactacgtgcgtccagagtttacagacacgttggccatcaaacagggccgtcacgca
attctggagcgaattggcagacagcagcctgtatcgaacaatagctacatctctgagggc
agcaactttgtcatcataacaggacccaacatgagtggcaaatccacttacctcaaacag
gtggcgctgtgtcagatcatggctcagataggctcgttcgtccctgctgagtatgcttgt
tttcgtgttgctgatcagattttcaccagaattggtgtagatgatgactttgaaaccaac
tcgtccaccttcatgttagaaatgaaggagatctcttacataatccacaatgcaagtgac
aagtccctgattattatagacgaattggggcgtggtaccagtgctgaggaagggattggt
atttgtcactcagtctgcgagtttctccttggcctgaaggcgttcactctgtttgctaca
cacttccttgaactgtgccagctggagtctctctacccgaacgtggaaaaccagcacatg
caggttcagcatacacgcagtggtgacactggtgcagagagcgtggtatacacatatttg
ctgaatcgaggatcctctgaagaaagacactatggtctgagagcagcagaaatgactgcc
cttccttcaagcataattcaagaggcaacgacaattgcttcaaaagttagccagcagttt
ttggctagacatcacactgatccagaaactcagaggcagcgagctgtgtaccacctctcc
acacgcctgcttcagactgccagaaactcaagactagaccccgatagcctgcgaatgtat
ctgaaaggtctaaagaagcagtatgaggcagagcttcagactgcagggcaagcagtggat
gcagaggagcagtga
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