KEGG   Oreochromis niloticus (Nile tilapia): 100702822
Entry
100702822         CDS       T06104                                 
Name
(RefSeq) high mobility group protein B1 isoform X1
  KO
K10802  high mobility group protein B1
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03410  Base excision repair
onl04140  Autophagy - animal
onl04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100702822
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100702822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:onl03036]
    100702822
   03400 DNA repair and recombination proteins [BR:onl03400]
    100702822
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100702822
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    100702822
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100702822
   MMR (mismatch excision repair)
    Other MMR factors
     100702822
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100702822
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Ets
Other DBs
NCBI-GeneID: 100702822
NCBI-ProteinID: XP_003450179
Ensembl: ENSONIG00000005505
UniProt: A0A3G1Z143
LinkDB
Position
LG14:complement(30327845..30331550)
AA seq 200 aa
MVKDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKLRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGLS
IGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSGPAAAADDDDN
EEEEEEGEEEEEEDEDDDDE
NT seq 603 nt   +upstreamnt  +downstreamnt
atggtgaaggatccaaagaagccgaggggcaaaatgtcctcatatgcctactttgtgcag
acatgccgggaggagcataagaagaaacaccctgatgccagtgtcaacttctcagagttc
tccaagaaatgctctgagcgatggaagacaatgtcaccaaaagagaaaggcaagtttgaa
gacatggccaagcaagacaagttgcgttatgagcgggaaatgaagaattacgtgcctccc
aagggccagaagaagaagcgattcaaggaccccaatgcccccaagagaccaccgtctgca
ttcttcctcttctgtgcagattttcgcccaaaaataaaaagtgaatatcctggcctttcc
attggggacacggcaaagaagttgggagagatgtggaatagctcatctgcggaagaaaag
cagccatatgagaagaaggctgccaagttgaaggagaaatatgacaaggatattgttgct
taccgcacaaagggaaaagtggattcaggaccagctgctgcagctgatgatgatgataat
gaagaagaggaggaggagggagaagaagaagaggaagaagatgaggatgatgatgatgag
tag

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