KEGG   Oreochromis niloticus (Nile tilapia): 100702828
Entry
100702828         CDS       T06104                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03013  Nucleocytoplasmic transport
onl04141  Protein processing in endoplasmic reticulum
onl04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100702828 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100702828 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100702828 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100702828 (sec13)
   04131 Membrane trafficking [BR:onl04131]
    100702828 (sec13)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100702828 (sec13)
Membrane trafficking [BR:onl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100702828 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100702828 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100702828 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_EML Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 100702828
NCBI-ProteinID: XP_005456487
Ensembl: ENSONIG00000005309
LinkDB
Position
LG5:4868840..4878343
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGSWDKMYEYTGHESSVNSVCWGPYEFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAIVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgtcattaacaccgtggacacctctcatgaggacatgattcacgatgcccag
atggactactacgggactcggctcgccacctgttcttctgaccgcaccgtcaagatcttt
gacgtcagaaacggagggcagatccttgtggcagacctcagaggccacgagggtcccgtg
tggcaggtagcgtgggctcatccaatgttcggcaacatcctggcttcctgttcctatgac
cgaaaagtcattatttggaaagaagagaacggatcctgggacaagatgtacgagtacacc
ggacacgagtcgtcagtgaactcagtctgctggggtccatatgagtttggtctaatcctg
gcctgtggcagttcagacggagcaatttcccttctcacgtttactggagatcagcagtgg
gacgtcaagaagatcagcaatgctcacactattggctgcaacgctgtaagctgggctccc
gctatagttccaggcagtttgattgatcagccatcgggacagaagccaaactacgtcaag
cgcttcgtctccggaggctgcgacaacctggtcaaactctggaaagaggaggatgggcag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagatgttggctgggct
ccatctattggtcttcccaccagcaccattgccagctgctctcaggatggacgagtattt
atctggacgtgtgacgaccctgcaggcaacacctggacggccaaactgctccacaagttc
aacgatgtggtgtggcacgtcagctggtcgatcactggaaatatactggctgtttcagga
ggagacaacaaggtaacgctgtggaaggagtcgatggatggtcagtgggcgtgtatcagt
gatgtcagcaaaggccagggcgcagtctccaccatcacagacacacagcagaatgagcag
tga

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