Oreochromis niloticus (Nile tilapia): 100703053
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Entry
100703053 CDS
T06104
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100703053 (ddx1)
03016 Transfer RNA biogenesis [BR:
onl03016
]
100703053 (ddx1)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100703053 (ddx1)
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100703053 (ddx1)
Transfer RNA biogenesis [BR:
onl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100703053 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100703053
NCBI-ProteinID:
XP_003440780
Ensembl:
ENSONIG00000000513
UniProt:
I3IVL5
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All DBs
Position
LG15:complement(7454049..7460956)
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AA seq
740 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASIKTGGAIFNSWQMNPYDRSTAFAIGSDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYVDLEKSQISFSKNGNDLGVAFEIPQNLKNQGFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDQAPEGHAVKSSQTGSAKVSQVKTSSNAPKALIIEPSKELAE
QTLNNVTQFKKYVDNPKLRELLVIGGVAAKDQLAALEQGVDIVVGTPGRLDDLISTGKLS
LSQVRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKSDHLWERLGKNHIRTDEVHSNDNTRPGAN
TAEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPNSKGHQL
SCVCLHGDRKPNERKNNLERFKKKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGRGCYNTRLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRALGGGNYKGHVDVLAPTVQELASLER
EAQTSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtttggtgaaatgggggtaatgcctgaaatcgcgcaggctgtggaagagatg
gactggctgttgcctactgacatccaggcggagtccatccccctcatccttggtggagga
gatgtgctcatggctgcggaaactggcagtggcaaaacaggagccttcagtatccctgtg
atccagattgtgtacgagaccttgaaggatcagcaggagggcaaaaagggcagagcctct
atcaaaactggaggagccattttcaacagctggcagatgaatccttatgatcgcagtaca
gccttcgcaattgggtcagatggcctgtgctgccagagcagggagttcaaagagtggcat
ggctgtcgctccactaaaggtgtcaccaaagggaagtactactatgaggtgacctgccat
gaccagggcctgtgccgggtgggttggtctaccagtcaggcggctctggacctgggaact
gataagtatgggtttggttttggtgggactggaaagaaatccaacaacaagcagtttgac
agctatggggaggagtttaccatgcatgacactattggatgctacgtggatctagaaaag
agccaaatttcattctctaaaaatggtaacgacctgggtgtggcttttgaaattcctcaa
aatctgaagaatcaaggtttctttgcttcctgtgtgctcaagaatgcagagctaaagttt
aactttggaggagaagattttaaacatccccctaagagtggatttgttgccctggaccag
gcaccagagggtcatgctgtcaaatcctctcagacaggcagtgccaaagtgagtcaggtg
aaaacatcctcaaatgcacccaaagctctgatcattgagccgtctaaagaactggctgaa
caaaccctcaacaatgtcacacagtttaagaaatacgtggacaatcccaaactcagggag
ctgctggtgattggtggtgtggctgccaaagaccagctggctgctctggaacagggggtt
gacattgtggtgggaacacctggtagattggacgacctcatttccactgggaaactgagt
ttgtcccaagtccgctttctggtgctggatgagtgtgatggcctcctgtcagcaggttat
acggacttcatcaacaggatccacaatcaaatccctcaggtcacctctgatggcaagaga
ctgcaggtcattgtatgctcagcgacactacattcattcgatgtgaagaagttatccgag
cgcatcatgcactttcccacctgggtggatctgaagggggaggactctgttccggagact
gttcaccacgtagtggtgcccgtcaatcctaagagcgaccatctgtgggagcgcctcggc
aagaaccacatccggactgatgaagttcattcaaatgataacaccagaccaggagccaat
actgcagaaatgtggtcagaggccatcaagatcctgaagggcgagtacgcagtgagagcc
attaaagaacacaaaatggaccaggctataatcttctgtcgtaccaaaattgactgtgac
aacatggagcagtacttcattcagcaaggaggaggtccaaacagcaaaggtcaccagctt
tcctgtgtttgcctccatggcgatcgtaagcctaatgagcggaaaaataacctggagcgc
ttcaagaaaaaagaagtgaggctgttgatctgcactgatgtagctgccagaggaattgac
atccacggagttccttatgtgattaacgtgactctgccagatgagaagcagaactatgtc
catcgtatcggcagagtgggaagagctgaaagaatgggattggctatctccttagttgct
atggagaaagagaaggtgtggtaccatgtttgcccgaaccgaggaagaggttgctacaac
acacgactgaaggaggatggaggatgcaccatctggtataatgaaaaagagctcctatca
gaaattgaggaacatcttaagtgcaccatcacccagtgtgagccagacatcaaagtaccc
gtggatgagtttgatggaaaggtgacctatgggcagcgcagagcactgggaggtggtaac
tacaagggtcacgtagatgttctggccccaaccgtccaggagctggcgagcctggagaga
gaagcccaaacatcctttcttcacctgggttatatgcccaaccagctattcagagccttc
tga
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