Oreochromis niloticus (Nile tilapia): 100703155
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Entry
100703155 CDS
T06104
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl00260
Glycine, serine and threonine metabolism
onl00630
Glyoxylate and dicarboxylate metabolism
onl00670
One carbon pool by folate
onl01100
Metabolic pathways
onl01200
Carbon metabolism
onl01230
Biosynthesis of amino acids
onl01240
Biosynthesis of cofactors
onl04981
Folate transport and metabolism
Module
onl_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100703155 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100703155 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100703155 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
100703155 (shmt1)
Enzymes [BR:
onl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
100703155 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
100703155
NCBI-ProteinID:
XP_005468426
Ensembl:
ENSONIG00000008491
LinkDB
All DBs
Position
LG4:10421504..10427252
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AA seq
482 aa
AA seq
DB search
MSLSNGHHVSKEEWESHNKMLLEPLAVNDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHIDELERLCQKRALEAYSLDSEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVHPETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYARLKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQLQVLANCKALSSALVDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVENDFRKVA
EFIHRGIELTVEVQKSLDPKANLKEFVQALSQGEKFQQRVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatctaacggccatcatgtgagcaaagaagaatgggaatcgcacaacaagatg
ctgctggagccgctggcagttaacgactcagaggtgttctccattattaaaaaagagaag
cacaggcagacgtacggtttggagctgatagcatctgagaactttgccagcagagctgtt
cttgaagcgctgggttcctgtatgaacaacaaatactccgagggctatcctggccagagg
tactacggtggtacggagcatatcgatgagctagagagactttgtcagaagagagcactg
gaggcctacagtctggactcggagaaatggggtgtcaacgttcagccatactcggggtca
cctgcaaatttcgccgtctacactgctgttgtggagccccacggcaggatcatggggctg
gatcttccagatggaggtcacctgacgcacggcttcatgactgagaagaaaaaaatctcg
gcaacctcaatcttctttgaatccatgccgtacaaggtccatccagagactggctacatc
gactacgacaggctgcaggaaaatgcacgactcttccaccctaaactcatcatcgcagga
acgagctgctattctcgcaaccttgactatgcccgcttgaagcagattgctaatgagaat
ggtgcctatctgatgggagacatggctcacataagtggattagtggctgccggagtggtg
ccctcaccctttgagcattgtgacattgttaccacgacgacgcacaagacactgcgtggc
tgccgtgctgggcttattttctacagaaaaggcgtgcggagtgtggatgccaaaggaaaa
gagactctgtacaacttggagtcattgattaaccaggccgtgtttcccggactgcaggga
ggaccgcacaaccacgccatcgcaggtgttgctgtagctctgaagcaagccatgacacca
gagtttaaggcctatcaattgcaggttctcgctaactgcaaggctctatccagcgctctt
gttgaccatggctacaagattgtcaccggcggctctgacaaccatctgatcctgctggac
ctgcgcagcaagggaaccgatggaggacgagcagagaaggtcctggaagcatgtgccatt
gcttgtaataaaaacacctgtccaggagataaaagtgctttgcggcctagcggcctgagg
ttcggctcgcctgctcttacctccagaggcttggtggagaatgacttcaggaaggtggct
gagttcattcacagaggcattgaactgactgtggaggtgcagaaaagtctggatcccaaa
gccaatctgaaagagtttgttcaggcattatcccagggagagaagttccagcagcgggta
gcagagatcagggctgaggtggaggctttcgccggacagttcccaatgccgggtctacct
gagctgtag
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