Oreochromis niloticus (Nile tilapia): 100703246
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Entry
100703246 CDS
T06104
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
100703246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100703246
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
100703246
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
100703246
NCBI-ProteinID:
XP_025765756
Ensembl:
ENSONIG00000016147
LinkDB
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Position
LG8:12685202..12778060
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AA seq
1240 aa
AA seq
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MEEERKGLAGDQKSVMPKNRERFNPDPSIHISKMNVIIPFSPDVPCDNNGQRMWWAFLAS
SMVTFFGGLFIILLWRTLKYLWTVCCHCNAKKKEVHRITTGDGIKRTDKDDAAASEVGWM
TSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDM
AFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRL
IQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSY
WECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGG
SYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRH
FTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKI
RIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMR
SFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDQ
GESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLI
YSKTPAYKKMKLACCFDCGRSERDCTCMPVNVRCNMDSPQRDIPLSAVSVNDCSATLRAS
KNSYNGYIKSIQEDQQSALSPKKKQRNGGMRNSPNSSPKIMRHDPLLILGNEQIESMDEN
VKKYDSTGMFHWCPSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSAVIGLRNFVMPLR
ASNFHYHELKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVI
LSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPVH
GLVRQTSVTTGANIPIITELAPLAKPGKKLPVISFSQDKSSGTSIQMITELVNDSNVQFL
DQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEG
LLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLC
FGIYRLRDAHLNTQNQCTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSH
SSHSSSKKSSSVHSIPTTNRTNRAKSRDSRDKQKKDMVYR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagcggaaggggctggcaggtgaccagaagtcggtaatgccgaaaaacagg
gagagattcaacccggacccatccatccacatatccaagatgaatgtgatcatcccgttc
tcaccagatgtgccctgtgacaacaacggccagcggatgtggtgggctttcctcgcctcc
tccatggtcactttctttgggggtctcttcataatcctgctgtggagaactctcaaatac
ctgtggaccgtatgctgccactgtaacgccaaaaagaaggaggtccatcggatcaccacg
ggcgatggtattaaacgcacggacaaggatgatgcagcggccagcgaggtgggctggatg
acctcggtcaaagactgggccggagtcatgatatctgctcagacgctgacaggaagagtc
ctggtggtgctcgtttttgcactcagcatcggagcccttgtgatatacttcatagattcc
tctgatcccatcgagtcctgtcagaacttctacaaagacttcacgttgcagattgacatg
gcattcaacgtcttcttcttgctctactttggccttcgttttattgctgccaatgacaag
ctgtggttctggctggaggtgaactctgtggtggacttcttcaccgttcctccagtgttt
gtgtcggtgtacctgaacaggagctggcttggtttgaggtttttaagggccttaagattg
atacagttctcagaaattttacagtttttgaatatactaaagacaagcaactcgattaag
ctggtgaacctgtgttcaatcttcataagcacatggctaactgcagcagggttcattcat
ttggtggaaaactcaggggatccttgggaaaacttccaaaattcccaggcactttcctac
tgggaatgtgtctacttactcatggttacaatgtccactgttggctatggagacgtgtat
gcaaaaaccaccctgggccgcctgtttatggtcttcttcatccttggtggtttggccatg
tttgcaagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggt
tcctatagtgcggttaatgggagaaagcacatcgtggtctgtggtcatataacacttgaa
agtgtatccaactttctaaaagacttcctacacaaggacagggatgatgtcaatgtagaa
attgtttttctccataatatttcccctaatcttgagctggaagccttgttcaagcgccac
ttcacccaggtagagttttaccaaggatctgtcctaaatccacatgacctggccagagtc
aagattgaatcagctgacgcctgcttgatcttagccaacaaatactgcgctgaccccgat
gccgaggacgcatccaacatcatgagagtaatatctatcaagaactaccacccaaagatc
aggataatcactcaaatgttgcagtaccacaataaggcccaccttttgaacatcccaagc
tggaactggaaggagggagatgacgccatttgccttgcagaactcaagcttgggttcatc
gcccagagctgcctggctcagggcctctccaccatgctggccaaccttttctccatgagg
tccttcatcaagattgaggaggatacatggcagaagtattaccttgaaggagtagccaat
gaaatgtacacagagtacctgtccagtgcctttgtgggtctgtccttcccaacaatttgc
gaactctgctatgtgaagctaaagctgctgctgatagctatagagtacaagtctgatcaa
ggggaaagcagcaccctgataaaccctggaaaccacgtgaaaatgcaggaggggaccttg
ggcttctttattgccagcgatgccaaagaagtaaagagggcactgttttattgtaaggcc
tgccacgatgacataactgatcccaaaaggataaagaaatgtggatgcaagaaattgata
tattccaagacgcctgcctacaagaaaatgaaactggcatgttgttttgattgcggtcgc
tcagagcgggactgcacttgcatgccggttaatgtgcgttgtaacatggactcccctcaa
cgggacatcccactctctgctgtctctgttaatgattgctcagccactttacgtgcctct
aaaaatagctataatggatatatcaaatcaattcaagaggaccaacaatcagcactatca
cccaaaaaaaagcaacgtaatggaggcatgagaaattctccaaactcctcacctaagatt
atgagacatgacccactcctcatcctgggaaacgagcagattgagagcatggacgagaac
gtaaagaaatacgactccacggggatgtttcactggtgcccgtccaaagacattgagaag
gtcatcttgacacggagtgaggcagccatgactgttctgagcggtcatgtggtcgtgtgc
atatttggagacgtgaaatcggcggtgatcggtctccgaaactttgtgatgcctctgaga
gcaagcaactttcactaccatgagctgaagcatattgtgtttgtcggctcccttgagtat
ctgaagcgggaatgggaaactcttcataatttccccaaagtctccattctgcccggcaca
ccgttgagtagggcagatctgagggctgtcaacatcaacctctgcgacatgtgtgtcatt
ctgtcagccaatcagaacaatattgacgatgcatcactgcaggacaaagaatgcatcttg
gcgtcactcaacatcaaatctatgcagtttgatgacagcatcggggtcttgcaggctaat
tctcaaggcttcacaccaccaggaatggatagatcatctcctgagaatagtccagtccat
ggactggtgaggcagacctctgtcaccactggagcaaacatccccatcataacagagcta
gcaccattagcaaagccaggcaaaaaactgcctgtgatttcattcagtcaggataaaagc
agtgggaccagcatacaaatgataactgagctggtgaatgactcgaatgttcagttcctg
gatcaagatgatgacgacgacccagacacagagttgtacctcacacagccttttgcctgt
gggacagcattcgcagtcagtgtgctggattcattaatgagtgcgacatacttcaatgat
aatatcctcaccttgatccggacgctggtaacgggcggggcgacaccggagctggagggg
ctgctggcagaggagaatgcattaagaggtggatacagcacaccacagaccctggcaaac
agggacaggtgtcgcgtggcacagctggccttgtacgatgggccctttgccgacctcggg
gatggtggttgttatggtgacctgttttgtaaagccctaaaaacgtataacatgttgtgt
tttggcatctatcggctacgagacgcacatctaaacacacaaaaccagtgtaccaaacga
tatgtcataaccaatccaccgtatgcatttgagctggtgccctcagacctgatattctgc
ctgatgcagtttgaccacaacgctggccagtctcgaaccagcctctcccattcttcccat
tcatcccattcttcaagcaaaaagagttcctccgtccactctatccccaccaccaaccgc
accaaccgagccaaaagcagggactcgcgagacaaacaaaaaaaagacatggtttacaga
tga
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