Oreochromis niloticus (Nile tilapia): 100703312
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Entry
100703312 CDS
T06104
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100703312 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100703312 (trim54)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100703312 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
TRIM_CC
Sina_RING
CoiA_N
Prok-RING_4
EFR3_ARM
Zn_ribbon_FGT1_2
Costars
DUF1664
Aldedh
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
100703312
NCBI-ProteinID:
XP_005464863
Ensembl:
ENSONIG00000010540
UniProt:
I3JWK8
LinkDB
All DBs
Position
LG15:complement(21554212..21572180)
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AA seq
365 aa
AA seq
DB search
MSFALGFKHPTAGSSGPGAGSGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCAN
DIFQSANPLWHSRGSSSATASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQ
ESSRLVSMKPEQQQQQLMCEEHEDEKINIYCLSCQTPTCSMCKVFGQHRDCDVAPLGTVY
MRQKTELSDGIAILVASNDNVQAVISQMEAICRTIEENGQRQREHLSGHFERLVSILEER
KQELVGLITREQDEKLKHVQSLIRQHSDHLEVGVTLVESGIQSMEEPHMPLFIQSAQAIL
EKMAVMARASKLELPELGYESMSHFVIDIDDLADTLRNINFCCSVAGDEEDFEEVEEELD
FGSRF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgctctcggctttaagcacccgacagcaggcagctctgggcccggtgctgga
agcggagccaccatggagaatctggaaaagcagctgatctgtcccgtctgcctggagatg
ttctccaaacctgtggtcatcctgccctgtcagcacaacctctgccgcaagtgtgccaat
gacatcttccagtcagctaatcctctgtggcattcccgtggttcctccagtgcgacggcc
agtggcggtcgctttcgctgtccgtcgtgccgccatgaggtggtgctcgaccgccatgga
gtctatggcctccagaggaacctgctggtggagaacattatcgacatctacagacagcag
gagtcctccagacttgttagcatgaaaccagagcagcagcagcagcagctcatgtgtgaa
gaacatgaagacgagaagatcaacatctactgcttgtcctgccagacgccgacctgctcc
atgtgcaaagtgttcggacagcacagagactgtgacgtggctccgctcggcaccgtctac
atgagacagaagacggagctgagtgacggcattgcgatcttggtggccagtaatgacaac
gtccaggcagtcatctctcagatggaagcaatctgccgcaccatagaggaaaacggccag
cggcagagagaacacctgagcggccactttgaacgtttggtgtccatcttggaggagcgg
aagcaggagctggtgggtctcatcaccagagaacaggatgaaaagctcaaacatgttcag
tcgctcatccgtcagcacagcgatcacctggaggtgggcgtcacgctggtcgagtcaggc
atacagtccatggaggagccgcacatgcctctgttcatacagagcgcccaagccatactg
gaaaaaatggcggtgatggcgagagcctcgaagttggagctcccagagctcggttatgag
agtatgagccacttcgtcatcgatatcgatgacctcgctgacacgctgagaaacatcaac
ttctgctgcagtgtggcaggtgatgaagaggattttgaagaagtggaggaagagttagac
tttggctccagattttaa
DBGET
integrated database retrieval system
