KEGG   Oreochromis niloticus (Nile tilapia): 100703456
Entry
100703456         CDS       T06104                                 
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:onl04990]
    100703456 (nwd1)
Domain-containing proteins not elsewhere classified [BR:onl04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   100703456 (nwd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd DUF4062 Beta-prop_TEP1_C Beta-prop_EML NACHT AAA_16 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_NWD2_C Beta-prop_WDR75_1st NPHP3_N Beta-prop_Nup120_160 AAA_22 Beta-prop_IFT122_1st NPHP3 AAA_19 APAF1_C TniB Y_phosphatase
Other DBs
NCBI-GeneID: 100703456
NCBI-ProteinID: XP_003451338
LinkDB
Position
LG23:complement(35824755..35843704)
AA seq 1635 aa
MMAQSPTEGRGGEIGPQDVLRGWTDGAQRMKSNMIRVFISSTFTDMSSERKALLEKAYPE
VRSFCCGLGLVFEVVDLRWGIRNVPSGDHEACEVFLEEIQRCEQMSAGPTFIALLGNRYG
HRALPRLIPEKLFDALLSKLSKNPEGIKTLNQWFKKDSNAVPPTYVLQPIIAHFPHYIDL
RPESGKQHDKDVLSWRLAETRLLRLLRSAATDAEDTGDITAEEKQRFYTSVTEREFERGL
WQNDCESSTLLFVREIPRQRSREGPKRLAKFMDVTGDGLLDAEAQGLLAGLKTRLFVKSQ
KILNLHSVELSRGSINPKCKEHAQYLDSVCEQFASQMKARIGAAMDSLGRRKMWGTTEEE
EKMDVLVVTEARRHIAISAELCRGFHGREGLLGKLCLAMWESSNVRHRPLVVHGGAGMGK
TAVLCKLAQEMRGVLEARAVVVIRLLAACHPQKPDIDHVLHSICTQVCLACGLAPPSPLT
VSTHLELLRFFWEVLEQVSQQGSALVIVLDSVEQLADQHHAHKLRWLPVDLPPNVHVVAS
METNSEAFANMRFKLDSLGSFFEAERLSCEEGERIIESDLRASQRTLTCEQSSAVLQTFE
SSGCPLHLKLILSVAKRWTSFTPLTELRLGTSTQEMMSHLFLMLEEKHGKELVGGALGYI
ALAREGLLEAELRDVMSLDDDVISEVYRYSLPPIPSLIRLPPLLWARLRRDLVDHLEERW
TDGVAAIAFNNKRLSEAVSARYLRSERRGRSLRILAEYFLGRWSGKLRPASLPGLSLLLS
DRKVPPQPLWFAPGLANIRKLQELPYHLLHSGLWEELRQEVISCAEWLSIKSRLCGVSSV
IHDLDQCSKYMDCTETGLIRDALVLIKPSLCFLEGHMEVSLFYSELLARLSSLSSVFPTV
IGRLCSQCEEWLLTCPDPILIPRSSFLQQPGGALQHTLSVLRGGVVCMDISVVTKLLVAG
SDDGVVEVWSMLDKQLVHTLLGHTASILAIKVIGSPAHCLSLAADGSLRRWSLMNGQQLF
CIEEAVPIDSTPSSVHLHLSEQLLFVYTRTQVKVWQLDGAELHLSSSDDEVWLVLGVLGE
SLVYLSNSGRVRISHPVYGTQLTVKTQLENSVRHRTVVTTLMLPKREKVFVVYKGGFLHQ
ISRTGKQTVAEFPLLPSFFSVTEDEKTLLAASECTLSLFSILGDSLDRFLDLQHDDDVLS
ACVSSDGRRLVSGAADQLVRVWSVTTGALMDSLCGADAPVTCVLLFNDFVVSASAATSSI
LLWNLKYDASTKPATRIPADSAHIALTKDGDQVFYVHQQSHTEVMSWNSHTGSVCERLPV
SAEVSCLELAQNKRLLLCGLMSGTVLIYPLALPQETLCIPPPESLCRVLCLTAGTQEKHL
AVAYEDSVCLFEITSRDNFPTVEGPLEKFALPLLHAPLSAMALLRNRRLLYGTSCGEVKL
WDFGRGGDVTDLEPHRSGVTCVTVSNRGAHALVGSEDAVQRLWALNPLALDHTMEYKGFL
FEGVLSAAFSETDRFVFTGSQDRTVKVWDVASGNLLFVQYIYSPIVQMVTFMDGFVAITR
QGAIIRELFRCPDHIGPDYNPVRSIRAQYRVTSREKDRDRPQTSVSNLQDFNPTQLNLNL
VGMFKAKPSSACVML
NT seq 4908 nt   +upstreamnt  +downstreamnt
atgatggcgcagagtccgacagaaggaagaggaggagagatcggcccgcaagatgtgctg
agaggatggacagacggagctcagaggatgaagagcaacatgatccgagtgttcatcagc
tccacgttcacagatatgagcagcgagaggaaggctctgctggagaaagcttacccagaa
gtccggtccttctgctgtgggctcggcctggtgttcgaggttgtggatctacgctggggg
atccgaaacgtcccgtcaggagaccacgaggcctgtgaggtcttcctggaggagatccag
cgctgcgagcagatgtcagctggtccaacgttcatcgctctgctggggaaccggtacggc
caccgagctcttcctcgactaattcccgaaaaactctttgacgctcttctgtccaaactc
tctaaaaatccagaaggcattaagacactcaaccagtggtttaaaaaagacagcaatgcc
gtcccacccacctatgtccttcagccaatcatagctcacttccctcattacatcgacctt
cggcctgagagcgggaagcagcacgacaaagatgtcctgtcatggcgcctggcagagact
cggctactgcgactacttcgatctgcagccacagacgccgaggacaccggtgacatcaca
gccgaggagaaacaacgcttctacacatcagtcacagagcgggagtttgagcgtggtttg
tggcagaatgactgtgaatcatctactctgctcttcgttcgtgagattccccgtcagagg
tccagggaggggcccaaacgtcttgccaagttcatggatgtgactggcgatggcctgctg
gatgccgaagctcagggactcctcgccgggctgaagacacggctctttgtcaagtcacag
aagatcctcaacctgcactccgtggagctgagcagaggaagcatcaatccgaagtgcaag
gagcatgctcagtacctggacagcgtctgcgagcagtttgcctcacagatgaaagctcgg
attggcgcagcgatggattcgctgggccggaggaagatgtggggaaccaccgaggaagag
gagaagatggacgtattggtggtcacagaggcgaggcggcacattgccatcagcgctgag
ctttgcagaggtttccatggcagggaggggctgctggggaagctgtgcctcgccatgtgg
gagtccagtaatgtccgccacaggccgctggtggttcatggtggcgccgggatggggaag
acggcggtgctgtgcaaactggcccaggagatgcgtggtgtactggaggccagggcagtg
gtggtgatcaggctgcttgcagcttgccaccctcaaaaacccgacattgaccacgtcctc
cacagcatctgcacacaggtatgcctggcttgtggtcttgctccgccctctccgctgaca
gtctccactcacttggagctgctgcgattcttctgggaagttcttgagcaggtttcccag
cagggcagtgctctggtcatcgtcctggactctgtggagcagctcgcagaccaacatcac
gctcacaagctccgctggctgcctgtcgacctcccacccaacgtccatgtggttgcctcc
atggaaaccaacagcgaggcatttgccaacatgcggtttaagttggactctctgggaagc
ttctttgaggcagagcgtttgtcttgcgaggaaggtgaacgcatcatagagtcagacctg
cgagcctctcagcggacgctgacatgcgagcagagcagcgcagtgctgcaaacttttgag
tcatctggctgcccgctccacctcaaactcatcctgtctgtcgccaaacgctggacgtcc
ttcacgccactgacagagctgcgtctgggtaccagcactcaggaaatgatgtcacacctc
ttccttatgctggaggaaaaacacgggaaggagctggtgggcggggctttggggtacatc
gctctagcaagagagggtctgctggaggctgagttgcgtgatgtcatgtccctggatgat
gatgtcatcagtgaggtgtaccggtactcccttcctccgattccctcactgatccggctg
ccgcccctcctgtgggcgcggctaaggcgggaccttgtggaccacctggaggagcgctgg
actgatggagtcgctgccatcgccttcaacaacaagcgtctgtccgaggcggtctcagca
cgttatttgaggtcagagcggcgggggcgaagtttgaggatcctggcagagtacttcctg
ggtcggtggtcagggaaactgaggccagcgtctctgccgggtctctcactgctgctgtct
gacagaaaggtcccgccccagccgctgtggtttgctccaggattggctaacatcaggaag
ctgcaggagctgccctaccacctgctgcacagtggtctgtgggaggagcttcgacaggaa
gttattagctgtgctgagtggctgtccattaagagccggctgtgtggtgtctcctctgtg
atccatgacctggaccagtgctccaagtacatggactgcacagagactggactgatacga
gatgctctggtcctgatcaaacccagcttatgcttcctggagggtcacatggaggtgtct
ttgttttactccgagttgttggcccgactgtcctcgctcagctccgtcttccccactgtg
attgggcggctgtgtagccagtgtgaggagtggttactgacgtgtccggatccaattctc
atcccaaggagcagcttcctgcagcagccagggggggcgctgcagcacacactaagtgtg
ctgcggggaggtgttgtctgcatggacatcagcgtggtgacgaagctcctagttgcgggg
tcagatgacggcgtggtggaggtctggagcatgcttgacaagcagcttgtacacaccttg
ctgggacacacagcttcaatcttggctatcaaggtgatcggcagccccgcccactgcctc
tcattggctgccgacggctcactgaggaggtggagcctgatgaatggccagcagctcttc
tgcatcgaggaggccgtgcctatagactccaccccttcatcggtgcacctccacctatct
gagcagctgctctttgtctacaccaggacacaggtgaaggtgtggcagctggatggggcg
gagctccacctgagcagcagcgatgatgaggtctggttggttctcggggttctgggagaa
tctctggtctatctgtccaactccggtcgggtcagaatctcgcacccagtttacgggact
cagttaacggtgaaaactcagctggaaaactcagtgaggcaccggactgttgtaaccacg
ttgatgctccctaaacgtgagaaagtgtttgttgtgtataaaggaggattcctccaccag
atttccaggacaggcaaacagactgttgccgagtttcctctgcttccttccttcttctca
gtcactgaagatgaaaaaaccctgttagcagccagtgagtgcactctgagcctcttcagc
atcctcggcgactctctggaccgattccttgacctccagcatgacgatgacgttttatcc
gcctgtgtctcctcagacggcaggcggctcgtctctggagctgcagaccaacttgtacga
gtgtggtcggtgaccacgggggcgctgatggactctctgtgtggggcggacgcccctgtc
acctgtgtgcttctctttaatgactttgtggtttcggcctcggcggccacctcctccatc
ctgctgtggaacctgaagtacgacgccagcaccaaacctgccacccgcattcctgcagac
tccgcccacatcgccctcaccaaagacggtgatcaggttttctacgtccaccagcagagc
cacactgaggtcatgagctggaacagccacacaggttctgtgtgcgagcgtttgcccgtc
tccgctgaggtgtcctgtctggagttggctcagaacaaacgtctcctcctctgcggcctg
atgagcggcaccgtcctcatctacccgttagccctgcctcaggagacgctttgcattccc
cccccggagagcctgtgcagggtcctctgcctcaccgccggcacccaggagaagcacctt
gcggtggcctacgaggactcggtgtgcctgttcgagatcacttccagggacaacttcccc
acggtggaggggcccctggagaagtttgcactgccccttctccacgccccgctgtccgcc
atggccctgctgcgcaaccgcaggctgctatatgggacgagctgtggggaggtgaagctg
tgggacttcggcaggggtggcgacgtcaccgacctggagcctcaccgcagcggagtgacc
tgtgtgacggtcagtaaccggggggctcatgctctggtgggctctgaggacgccgtgcag
aggctgtgggccctgaacccgctggccctggaccacaccatggagtacaagggctttctc
tttgagggcgtcctctctgctgcgttctctgaaaccgaccgcttcgtcttcaccgggtct
caggaccgaactgtcaaagtctgggacgttgcatcaggaaacctgctcttcgttcagtac
atctactccccgatcgtccagatggtgaccttcatggacggctttgtggccataacccgg
cagggtgccatcatcagagagctgtttcggtgtccggaccacatcggccccgactacaac
cctgtgaggagtatcagagcccagtaccgggtcacctctagggagaaggaccgggacaga
ccacagacctccgtatccaacctgcaggactttaaccccacccagttaaacctgaatctc
gtgggcatgttcaaagccaaaccctcctctgcatgtgtcatgctgtag

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