Oreochromis niloticus (Nile tilapia): 100703520
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Entry
100703520 CDS
T06104
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
onl03015
mRNA surveillance pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100703520 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
100703520 (rbm8a)
03015 mRNA surveillance pathway
100703520 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100703520 (rbm8a)
03041 Spliceosome [BR:
onl03041
]
100703520 (rbm8a)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100703520 (rbm8a)
Spliceosome [BR:
onl03041
]
Complex C
Other components
EJC/TREX
100703520 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
100703520
NCBI-ProteinID:
XP_005472880
Ensembl:
ENSONIG00000008608
UniProt:
A0A669FAD3
LinkDB
All DBs
Position
LG11:34771423..34776455
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRTKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWCFVRGPPKNKRRAGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggaccttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaagagaaagccaagaagaggaaaggaagaggcttc
ggttcagaggagggagcccggtccagaaccaaagaggactatgatactgtggaacaagat
ggggatgagccaggccctcagagatctgtggagggctggatcctctttgtgacgggtgta
catgaggaggccacagaggaggacatccatgacaagttttcagagtttggagaaatcaaa
aacctccatctcaaccttgatcgcagaacaggttaccttaagggttatgcactggttgag
tatgagacgtacaaagaggctcaagcagccatggaagggctcaacggtcaggacatgatg
ggccagcctatcagtgtagactggtgttttgtcagagggcctcccaagaacaagagaagg
gctggtggacggaggcgcagcagaagtccagacaggaggcggcgttga
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