Oreochromis niloticus (Nile tilapia): 100703737
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Entry
100703737 CDS
T06104
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04137
Mitophagy - animal
onl04140
Autophagy - animal
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100703737 (hif1a)
04137 Mitophagy - animal
100703737 (hif1a)
04148 Efferocytosis
100703737 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100703737 (hif1a)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100703737 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
YceD
Motif
Other DBs
NCBI-GeneID:
100703737
NCBI-ProteinID:
XP_005477095
Ensembl:
ENSONIG00000020112
UniProt:
A0A669BBA6
LinkDB
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Position
LG19:11967742..11982655
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AA seq
769 aa
AA seq
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MDTGTVPEKKSRATSERRKEKSRDAARCRRGKESEVFYELAQQLPLSHSVSSSLDKASIM
RLTISYLRMRKLLSTDEPPTEEDAELDMQLNSSYLKALEGFLMVLSEDGDMIYLSENVSK
CLGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKSKEPNTERSFFLRMKCTLTSRG
RTVNVKSATWKVLHCTGHVRVYDSPAEEGTNGQKEPPVPYLVLICDPIPHPSNIEVPLDT
KTFLSRHTMDMKFTYCDERITDLMGYDPEDLLDRSVYEYYHALDSDHLTKTHHNLFAKGQ
VCTGQYRMLAKKGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSVKQTAD
VKPVKEEHQEEDQLVVEISQVELSPVQPKKAELEKEEEVQEEEEVVVKGPKMNILKILTD
SAVTQLPVNLYDHLKGEPEALTMLAPAAGDTIVSLDFSCPGTESDIHLLKDVPLYNDVML
PSTDDKLVLPLSPLPPSEPLNVSSTNSEDSKSESYTPAQSTTTTSHRPPVPGSPLDFCFP
MDSEMNSDFKLDLVEKLFAIDTEPKTPFNTQEMEDFDLEMLAPYIPMDDDFQLLSLPPGE
PLSCGSVKSLESTPIHSYPSSPFSAPGSRTASPAPPVEPVDAPHPPTILANGAPKLEKEV
PLRTLAVQNAQRKRKICDLKEIIEQGTSLQEQVEKGKKLKPSGSGTTRTIVLLSSDLASR
LLGSTSEATSSSFGLPLLTRDDCEVNAPLQGRQYLLQGEELLRALDHIN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaactgtacccgaaaagaaaagcagagcgacctcagagcgcaggaaggag
aaatcaagggatgcagcacgatgccggcgtgggaaggagtcagaggtgttttacgagctg
gcccagcagctgcccctgtcccacagtgtcagctccagcctggacaaggcctcaatcatg
agactcaccatcagttacctgcgcatgagaaaattgctttccactgatgagccaccaaca
gaggaagatgcagagcttgatatgcagctaaacagctcctacctaaaagctctggagggc
tttctcatggtgctgtccgaggatggagatatgatctatctctccgagaatgtcagcaag
tgcctcgggcttgcacagtttgacttgactggacacagtgtgtttgacttcacacatccc
tgtgaccaagaggagctgagggagatgctagtccacagaacaggctccaagaaatccaag
gaaccaaatacagagcgtagcttctttctgcggatgaagtgcaccctcacgagcaggggc
cgcactgtcaacgtcaaatctgctacatggaaggtgcttcactgcacaggtcacgtgcgc
gtttatgacagcccagccgaagagggcaccaacggacaaaaggagccacctgtgccctac
ctggttttgatctgcgatcccatcccacacccctccaacattgaggtccctctggacacc
aagactttcctcagccgccacacaatggacatgaagttcacgtattgtgatgagaggatc
actgatctcatgggttatgatccagaggacctgttggatcgttctgtgtatgagtactac
catgctcttgattcagaccaccttaccaagacccaccacaacttgtttgcaaagggccaa
gtctgcacaggccagtaccgaatgttggctaagaaaggaggcttcgtgtgggtggaaaca
caagccactgtcatttacaacaacaagaactcccagccacagtgtgttgtctgtgtcaac
tttgtgctcagtggcatccaggaggagaaactgatcttgtcagtgaagcagaccgcagat
gtgaagccggtaaaggaggaacaccaggaggaagaccagcttgtagtcgagatcagccag
gtcgagctctctccagtccagccaaagaaggctgaactggagaaggaggaggaagtgcag
gaggaggaggaggtggtggtgaaaggcccaaagatgaacatactcaaaatccttactgat
tcggcagtcacccagctgccggttaacctgtatgaccacctaaagggagagcctgaagcc
ctcaccatgctggcaccagctgccggagacacgattgtctccctggacttcagctgcccc
ggtacagaatcagatatccatcttctgaaggatgtccctctctacaacgatgtaatgctt
ccctccacagatgacaagctggttctgcctctttcccctctgccacccagtgagcctctg
aatgtgtccagcacaaactctgaggattcaaagtctgagagctatactccagcccagtct
actaccacaaccagccacaggcccccagtgcccggcagtccactggacttctgcttcccc
atggattcagagatgaactcggacttcaagctagacttggttgagaagctatttgctatt
gatacagagcccaaaacgcccttcaacacacaggaaatggaagactttgatctggagatg
ttagctccatacattcccatggatgatgatttccagctgctcagcctgcccccaggagag
cctttgtcttgtggatcagtcaagtccctcgagagtactccaatccacagctatcccagc
tcccccttcagtgcgccaggcagtcgcacagcttccccagcgccacctgtggagcctgta
gatgctcctcatcctcccaccatcttggcaaatggagccccaaagttggagaaagaggtg
ccgctgaggaccctcgcagttcagaatgcacagcgcaaaagaaaaatttgtgacctaaaa
gagattattgaacagggaacttcactccaggagcaggttgagaagggcaaaaagctgaag
ccttcagggtctggtacaaccaggaccatcgttctgctgtcttcagatttggcaagtcgc
ctgcttggcagcacttcagaggccaccagttcctccttcggcctgccgctcctcacccgc
gacgactgcgaggtgaacgcacccttacagggtcgtcagtacttgctgcagggggaggag
ttgcttcgtgctctggaccacatcaactga
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