Oreochromis niloticus (Nile tilapia): 100703786
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Entry
100703786 CDS
T06104
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100703786 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100703786 (hbs1l)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100703786 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
100703786
NCBI-ProteinID:
XP_003440699
Ensembl:
ENSONIG00000000460
UniProt:
A0A669EGN9
LinkDB
All DBs
Position
LG15:8005080..8030351
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AA seq
688 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCCISPATANQFIYSRQERHAPREEPLEEEE
FEDEAVPVSPTVNHNLSPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIKCGFDPQRALD
AVLSEDTKTAPVTRSTAEEIGTVERANQDKAPQPQRTKQEAVADKAKSRDASHNKLDSEV
LPKVARMTVSGKKQTMGFDVRSTGENGVVVTATEAASKRPETPSKGSNGDEPVTGPTPSR
SSGKARQAINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPNMI
TGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQE
RFQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVSQLTSWYSGLSLLEQIDA
FKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGHIQTGDRILAMPPNETCTVKGITL
HDEALDWAAAGDHVSLTLTGMDIIKINMGCVFCDPKEPIRVCTRFRARVLIFNIEIPITQ
GFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQRPVSLELY
KDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatagaaatgttcgaggttacaactacgatgaagactttgaagatgatgac
atgtatggacagtctgtggaggatgactactgttgcatttcaccagcaacagcaaatcag
ttcatctactcgcgtcaagaaagacatgcaccaagggaagagcctttagaggaggaagaa
tttgaagatgaggctgtccctgtgtcccctactgtcaaccacaacctcagccctcttgat
caagccaagctgtattcctgtctggaccacatgcggactgtgctgggagatgcagtgccg
gactcagtcctgacccaggcagccataaaatgtggatttgacccacagagggcactggac
gcagtactgtctgaagacactaaaaccgctccagttaccagaagtacagctgaagagatt
ggtacagtagagcgagctaaccaggacaaagcgccacaaccacaaagaaccaaacaagag
gctgtggctgacaaagctaaaagcagagatgcttctcacaataaactggactctgaagtt
ttacccaaagtggcccgcatgaccgtctctggaaagaagcagactatgggttttgatgtt
cgaagcacaggggagaacggtgttgtcgtcacagctacagaagctgcctccaaacgcccc
gagactccatctaaagggtccaacggggacgagcccgtcaccggtcccaccccgagccgt
tcatctgggaaggcacggcaggccatcaatatcaaagctgagctggagaagcgacaaggg
ggaaagcctctgttaaatttggtagttataggtcacgtggatgcgggtaagagcacactg
atgggccacctgctatatctgctcggcaatgtcaacaaacgcaccatgcataagtacgag
caggagtcgaaaaaggcaggaaaagcctccttcgcctatgcttgggttctggatgaaacg
ggcgaggagagagacagaggtgttacaatggatgtgggcatgacaaagtttgagacaaac
tctaaagtggtgacactgatggatgcaccaggacacaaagacttcatccccaacatgatc
acgggagctgcacaggctgatgtggcggtgctcgtggtggatgccagcagaggagagttt
gaggcaggcttcgaggcaggtggtcagaccagagagcatgccttgctggtgcgttcgctg
ggtgtcactcagctggctgtagctgtcaacaagatggaccaggtaaactggcaacaggag
cgtttccaagaaatcatctcgaaacttggccattttctcaagcaggcaggattcaaggag
tccgatgttttctacatccccaccagcggcctgtcaggagaaaaccttgccaccaggagc
tcagtgtcacagctcacctcttggtactctgggctgagcctgctggagcagattgatgct
ttcaaggcccctcagaggtctgtagacaaacctttcagattgtgtgtctccgatgtcttt
aaagaccagggttcaggcttctgtgttacaggaaagatcgaggctggtcatattcaaact
ggagacagaatactggcaatgcctccaaatgaaacctgcactgtcaaaggaattactcta
cacgatgaggctctggactgggctgcagcaggagaccacgtcagcctgacactcactggc
atggacatcattaagatcaatatgggctgtgtgttctgtgatcccaaagaacctattcga
gtttgcactcgattcagagctcgagtcctcattttcaatatcgagatccccatcacacaa
ggcttcccagtactgttgcactaccagacagtcagcgaaccggccaccataaggaagtta
attagtgttctacacaagagcagcggcgaggtcctgaagaagaaaccaaagtgtttgagt
aagggtatgaatgccatcgtggagatccagacccagaggcccgtgtcattagagctgtac
aaagactataaggagctgggccgcttcatgctgcgatatgttggctccaccatcgccgcg
ggggttgtcactgagatcaaagaatga
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