Entry |
|
Name |
(RefSeq) endoribonuclease ZC3H12A
|
KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
|
Organism |
onl Oreochromis niloticus (Nile tilapia)
|
Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:onl03019]
100703809
Messenger RNA biogenesis [BR:onl03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100703809
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
LG22:complement(13691869..13705057)
|
AA seq |
643 aa
MNTDVLLCPAVQTWSKTLISEPHRPTHSHTSAWASPSLLPLRDSCRPFCETMYPGEPDPN
TDPQLLESQLDFFHKLGYSTAQVQAVQQKFGPNMDTDKVLGELVRIGPVQEANQGLVTTM
SVLVPRGETQPSGPTLLLPVAGTSPQSKEETGEEGKTLRPVVIDGSNVAMSHGNKEVFSC
LGIQLAVNFFLDRGHTEITVFVPSWRKEQPRPDVPITDQQILRELERKRILVFTPSRRYA
GKRVVCNDDCYIVKHAFESDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFMPP
DDPLGRHGPTLENFLRRVPKTQKKQLCPYGKKCTYGIKCKFHHPERAKQSNRALADELRE
SAKQPTAPQKQSSACSSPVPGLSLLLVEDMAKKLTLGNESSSIKKAHKNEKLAQVKASHC
SSKKASSKKEKSSKHASSDHNSVQHSRSQEQLDSGLGSIDSQPVEAPRSLSDHQFGLPYS
SCQQYCPPKSAPCSCCSHGTRSCGSAPAFPTHNIGPVNSHSADMMPYSLPHYPNYCAYPV
SMNPYSQPTNFQRSQTHSFQRPRWSDPFCGQPAVVRSLPGDPSHWEPPPMKPGPSREERE
VIRKKLLAIFSAQLVDTAMDMFPQMMDPQMLVVEILKLQSQLR |
NT seq |
1932 nt +upstreamnt +downstreamnt
atgaatactgatgttttactctgcccagctgtgcagacgtggagtaaaaccctcatttca
gagccacaccgccccacacactcccacacctctgcatgggcctctccttcactgctacca
cttcgcgactcttgccgtcccttctgtgagaccatgtacccaggtgaacctgacccgaac
acggacccgcagctcttggagtcccagctggacttcttccacaagctgggctactccacg
gctcaggtacaggctgttcagcagaagttcggccccaacatggacacggataaagtgctg
ggggagctggttcggatcgggcccgttcaggaggccaatcaggggctggtgaccacaatg
tcggtgctggtgcccagaggagaaacccagccatcgggccctacactgctgctgcctgta
gctggcacttctcctcagagcaaagaggagactggcgaggaaggaaagactctgagaccc
gtcgttatagacggcagcaatgtggccatgagccacggcaacaaggaagttttctcttgt
ctgggaatccagttggctgtgaacttcttcctggacagaggccacactgaaatcactgtg
tttgttccctcatggagaaaggagcagcccaggccggatgttcccattacagatcagcaa
attctgcgtgagctggagaggaaaaggattctggtgttcacaccgtcgcggcgctatgca
ggcaaacgggtggtctgtaatgacgactgctacattgtcaagcacgcctttgagtctgac
ggcatcatcgtgtccaacgacatgtaccgtgaccttcagggagagaagccggagtggaag
cgcttcatcgaagagaggttgctcatgtactcctttgttaataacaaatttatgcccccc
gatgatccgctcggtcgacatggaccaaccctggagaacttcctgcggagggttccaaag
actcagaaaaaacagctgtgtccttatgggaagaaatgtacttatggaatcaaatgtaaa
ttccaccatcccgagcgagccaaacagtccaatcgtgctcttgcagacgagcttcgggag
agtgctaagcagcctactgctcctcagaaacaatcttcagcttgctccagtcctgtgcct
ggactcagcctcctgttggtggaggatatggcgaagaaactgactctgggaaacgagagc
agctccataaaaaaagctcataaaaatgaaaagctagctcaggtgaaggcaagtcactgc
tccagcaagaaggcctcatcaaagaaggagaagtccagcaaacatgcgtcatctgatcac
aactcggtgcagcacagtcgctctcaggagcagctggactctggtttaggctccatagac
agccagccggtggaagctcctcggagtctgagtgatcaccagtttgggctaccgtacagc
agctgtcagcagtactgccctccaaaaagtgccccgtgcagctgctgctcacatggcact
cgctcttgtgggagtgcaccagctttcccaactcacaacatcgggccagtgaacagccac
agcgctgatatgatgccctacagtctgccccactatccaaactattgcgcttacccagtc
agcatgaatccgtacagccagccaacaaatttccagcgcagccaaacccacagcttccag
aggccacgatggtccgatccattctgcggtcaaccggcggtggtccgcagcctcccggga
gatccctcacactgggagcctcctccaatgaagccaggtcccagcagggaggagagagag
gttatacggaaaaagctcctcgctatcttcagcgcccagctggtggatacagccatggac
atgttccctcagatgatggatccacagatgctcgtggtcgaaatcctcaagttgcagagt
cagctgagatga |