Oreochromis niloticus (Nile tilapia): 100703809
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Entry
100703809 CDS
T06104
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100703809
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100703809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100703809
NCBI-ProteinID:
XP_005452826
Ensembl:
ENSONIG00000013685
UniProt:
I3K7X7
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All DBs
Position
LG22:complement(13691869..13705057)
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AA seq
643 aa
AA seq
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MNTDVLLCPAVQTWSKTLISEPHRPTHSHTSAWASPSLLPLRDSCRPFCETMYPGEPDPN
TDPQLLESQLDFFHKLGYSTAQVQAVQQKFGPNMDTDKVLGELVRIGPVQEANQGLVTTM
SVLVPRGETQPSGPTLLLPVAGTSPQSKEETGEEGKTLRPVVIDGSNVAMSHGNKEVFSC
LGIQLAVNFFLDRGHTEITVFVPSWRKEQPRPDVPITDQQILRELERKRILVFTPSRRYA
GKRVVCNDDCYIVKHAFESDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFMPP
DDPLGRHGPTLENFLRRVPKTQKKQLCPYGKKCTYGIKCKFHHPERAKQSNRALADELRE
SAKQPTAPQKQSSACSSPVPGLSLLLVEDMAKKLTLGNESSSIKKAHKNEKLAQVKASHC
SSKKASSKKEKSSKHASSDHNSVQHSRSQEQLDSGLGSIDSQPVEAPRSLSDHQFGLPYS
SCQQYCPPKSAPCSCCSHGTRSCGSAPAFPTHNIGPVNSHSADMMPYSLPHYPNYCAYPV
SMNPYSQPTNFQRSQTHSFQRPRWSDPFCGQPAVVRSLPGDPSHWEPPPMKPGPSREERE
VIRKKLLAIFSAQLVDTAMDMFPQMMDPQMLVVEILKLQSQLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgatgttttactctgcccagctgtgcagacgtggagtaaaaccctcatttca
gagccacaccgccccacacactcccacacctctgcatgggcctctccttcactgctacca
cttcgcgactcttgccgtcccttctgtgagaccatgtacccaggtgaacctgacccgaac
acggacccgcagctcttggagtcccagctggacttcttccacaagctgggctactccacg
gctcaggtacaggctgttcagcagaagttcggccccaacatggacacggataaagtgctg
ggggagctggttcggatcgggcccgttcaggaggccaatcaggggctggtgaccacaatg
tcggtgctggtgcccagaggagaaacccagccatcgggccctacactgctgctgcctgta
gctggcacttctcctcagagcaaagaggagactggcgaggaaggaaagactctgagaccc
gtcgttatagacggcagcaatgtggccatgagccacggcaacaaggaagttttctcttgt
ctgggaatccagttggctgtgaacttcttcctggacagaggccacactgaaatcactgtg
tttgttccctcatggagaaaggagcagcccaggccggatgttcccattacagatcagcaa
attctgcgtgagctggagaggaaaaggattctggtgttcacaccgtcgcggcgctatgca
ggcaaacgggtggtctgtaatgacgactgctacattgtcaagcacgcctttgagtctgac
ggcatcatcgtgtccaacgacatgtaccgtgaccttcagggagagaagccggagtggaag
cgcttcatcgaagagaggttgctcatgtactcctttgttaataacaaatttatgcccccc
gatgatccgctcggtcgacatggaccaaccctggagaacttcctgcggagggttccaaag
actcagaaaaaacagctgtgtccttatgggaagaaatgtacttatggaatcaaatgtaaa
ttccaccatcccgagcgagccaaacagtccaatcgtgctcttgcagacgagcttcgggag
agtgctaagcagcctactgctcctcagaaacaatcttcagcttgctccagtcctgtgcct
ggactcagcctcctgttggtggaggatatggcgaagaaactgactctgggaaacgagagc
agctccataaaaaaagctcataaaaatgaaaagctagctcaggtgaaggcaagtcactgc
tccagcaagaaggcctcatcaaagaaggagaagtccagcaaacatgcgtcatctgatcac
aactcggtgcagcacagtcgctctcaggagcagctggactctggtttaggctccatagac
agccagccggtggaagctcctcggagtctgagtgatcaccagtttgggctaccgtacagc
agctgtcagcagtactgccctccaaaaagtgccccgtgcagctgctgctcacatggcact
cgctcttgtgggagtgcaccagctttcccaactcacaacatcgggccagtgaacagccac
agcgctgatatgatgccctacagtctgccccactatccaaactattgcgcttacccagtc
agcatgaatccgtacagccagccaacaaatttccagcgcagccaaacccacagcttccag
aggccacgatggtccgatccattctgcggtcaaccggcggtggtccgcagcctcccggga
gatccctcacactgggagcctcctccaatgaagccaggtcccagcagggaggagagagag
gttatacggaaaaagctcctcgctatcttcagcgcccagctggtggatacagccatggac
atgttccctcagatgatggatccacagatgctcgtggtcgaaatcctcaagttgcagagt
cagctgagatga
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