Oreochromis niloticus (Nile tilapia): 100703814
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Entry
100703814 CDS
T06104
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100703814 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100703814 (l1cam)
04090 CD molecules [BR:
onl04090
]
100703814 (l1cam)
04091 Lectins [BR:
onl04091
]
100703814 (l1cam)
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
L1 family
100703814 (l1cam)
CD molecules [BR:
onl04090
]
Proteins
100703814 (l1cam)
Lectins [BR:
onl04091
]
I-type lectins (Siglecs)
100703814 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Bravo_FIGEY
C2-set_2
Ig_5
Sp38
V-set_CD47
C2-set_3
Ig_C17orf99
CRLF2-like_D2
DUF4998
Motif
Other DBs
NCBI-GeneID:
100703814
NCBI-ProteinID:
XP_005478148
Ensembl:
ENSONIG00000012032
LinkDB
All DBs
Position
LG20:complement(20069234..20113559)
Genome browser
AA seq
1283 aa
AA seq
DB search
MPDTQRQQVGSRGQCSSCLLPLVLILLSLATQPSQAAINIPPNYRIRDLKRPPVIKTQPE
SVTVFSTEDFVMNCEASGNPSPIFRWAKDGEDFDPGSDPELKVSESSGSFAFYTLSNTMD
TLNKYKGKYVCYASNELGTAVSNEAILNTDVPPSQQKDKKVDETADEGKSFILKCNPPQS
SMEPIIHWMDLRLRHIELSKRVMVGKDGNLYFANLESSDSRDDYTCNVQYLATRTILAKE
PTSLKVNPSNSVLRNRRPQMMRPTGHHSTYHALRGQTLELECIVEGLPTPEVSWMRRDGE
LSETRTTKDMFDRRLRFTNISESDGGEYQCIAENSQGNTKHIYMLTVEAAPYWIKEPVSQ
LYAPGETVRLDCQADGIPSPIISWTINGVPISGVDKDPRRTLTASGSLILEDVNFGDTAI
YQCRASNKHGTILTNTNVYVIELPPQILTDDGNTYAYTEGQKALLECETFGSPKPKVIWE
RNNDSSFLLADRRVNPLSNGWLEIANVTHSDDGIYTCTVPNSNLSISAELEIFNRTVILS
PPQALKVQAGERAIFTCLSLADPRLDPPFIQWRKNNQKLADSNNDKKYTMDGPDLKIADV
QPDDEGVYTCEIITKLDVAEARGTLTLWDRPDPPILLQISDPKDRTVTLSWTPGDDHNGP
VTEYVVEFEDQRSNESVWKMLARVRENKERAVLSLWPFMSYRFRVIAINDVGKSDPSKPS
GIHNTPAEAPDNNPEDVKSESIEPNTLVITWKKMDKTEVHGPGFKYCVQWRQAVGGGPDW
HEKNVTEPPFRVDNVGNFSAYEIKVQALNEIGRGPEPDPVIGYSGEDVPLEAPMDVGVEI
INSTTIKVTWAPIDKETVRGHLLGYKIHYTRKVHRSHHRGRRAQELESTVVVKTEPNEKK
KVISDLRPFSNYTLKVTVYNIKGEGPFSEALPFETPEGVPGPPLTLTLDSPSETEMTLHW
TPPGQPNGVLIGYLLQYQQITESDDSPMQVETIDDPTVTHITLKNLDHKSDYRFYLRGRT
AAGDGVPITMKGATMLDGVVPMEISLSVGENAVNFSWVPEKRHRNVGFQIQYSNKNDGNK
WKATEKVNSSQSFYQLQGLTPGSQYSFQFIYNNTVFFNTDIKTEGTGVTEMQPSFATQGW
FIGVVSAIGLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESD
LEEKQTASQPSLCEKSKLYSEDNLDFNGSSAMTTELNMDESLASQISRPSGGPEGFLPEN
APLNPTTFSPATNGVPNSVTILD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacacgcagcgacagcaggttggcagtagggggcagtgctccagctgcctcctc
ccccttgtcctcatccttctctcccttgcaacccagcccagccaagcagccataaatatt
ccccccaattaccgcataagagatctcaagaggcctccagtgatcaaaacacagccggag
tctgtcaccgtatttagcactgaggacttcgtcatgaactgtgaagcctctggcaaccct
tcacccatcttccgatgggcaaaggacggagaagactttgacccaggcagtgacccagag
ctgaaggtttctgaaagctctggctcattcgcattctacacacttagcaacaccatggac
acactgaacaagtacaaaggcaaatatgtttgctacgcgtccaatgagctggggacagct
gtgtctaacgaggccatactgaacacggatgttcccccctcccagcagaaagataaaaag
gttgatgagacggctgacgagggaaaaagttttattctgaagtgtaaccccccacaaagt
tctatggagcctatcattcactggatggacttaaggttacgtcatatcgagcttagtaag
cgggtgatggtggggaaggacggcaatctgtactttgccaatctggaaagttcggacagc
agggatgactacacgtgcaatgtccagtacctggcaacacgcacgattctggcaaaagag
cccacctctctgaaagtcaacccctccaactcggtgctgcggaacagaaggccccaaatg
atgagacctactggacatcacagcacgtaccacgccctgaggggacagacactagagcta
gagtgcatcgtcgaaggccttccaactccagaagtgtcctggatgaggagggatggcgag
ctgtcagaaactcggaccaccaaagatatgtttgaccgccgcttgcgcttcactaatatc
tcggaaagtgacgggggtgaataccagtgtatagctgagaactcccaagggaacaccaaa
cacatttacatgttgactgtggaagctgcaccttattggatcaaggagccagtcagtcag
ctatatgccccaggtgagacagtcagattagactgtcaggcagatggcattccctctcct
atcatcagctggaccatcaacggggtccccatctcaggagttgataaggaccctaggcgt
actctgacagcaagcggatctctgatcctggaggatgtgaactttggagacactgccatc
tatcagtgtcgggcctccaacaaacatggaaccatcctcacaaacaccaatgtttatgtc
atcgagctgcctccccagatccttaccgatgatgggaatacatatgcgtatacagagggc
cagaaggctttactggagtgtgagacctttggctctcctaaaccaaaagtgatatgggaa
agaaacaacgacagctccttccttctagcagatcgcagagttaaccctctcagcaatggg
tggctcgagatcgctaatgtcacccacagcgatgacgggatctacacctgcactgtgcca
aattccaatttgtcaatcagtgctgagctggaaatattcaataggacagtgatactgtca
cccccacaggctctgaaggtccaggctggagagagagccattttcacctgcctgagcctc
gctgaccccagactcgaccctcctttcattcagtggagaaagaacaaccagaagctggct
gattccaacaatgataaaaagtatacaatggatggaccggatctcaaaatagctgatgtg
cagccagatgatgagggagtgtacacctgtgagatcatcacaaaactggatgtagcagaa
gccaggggtaccctcaccttatgggatcgtccagaccctcctatcctcctacagatctct
gatcctaaggatcgtactgtcaccctcagctggactcctggagacgaccacaacggccca
gtgacagagtatgtggttgagtttgaggaccaacgttcgaatgagagcgtctggaaaatg
ctggccagagttagggaaaacaaagaacgggccgttctctccctatggcccttcatgtcc
taccgtttccgggtcatcgccatcaatgacgtgggcaagagcgaccccagcaaaccatct
ggaatacacaacacacctgctgaagctccagataataaccctgaagatgtcaagagtgag
tccattgaaccgaacactctggtcatcacctggaagaaaatggacaaaaccgaggtccac
ggacctggcttcaagtactgtgtgcagtggagacaagcagtgggaggtgggcccgactgg
catgagaaaaatgtaacagagccgccattccgtgttgacaatgttgggaacttctctgcg
tatgagattaaagttcaggctctcaatgagatagggaggggacctgagccagacccagtc
ataggctactcgggagaagatgttcctttagaggccccaatggatgtgggtgttgaaata
ataaacagcactacaatcaaagtgacctgggcacctatagacaaagagacggtcagagga
cacctgctgggatacaagatccactataccaggaaagtgcataggagccaccaccgaggc
cgcagggcacaagagttagaaagcactgtggtggtgaaaacggagcccaacgagaagaag
aaagtgatcagtgatctgaggccgttctccaactacacccttaaggtgactgtatacaac
ataaagggagaaggacccttctctgaggcgctgccctttgagactccagagggagtccct
ggtcctcccttgaccctgaccctagacagcccatcagagacagaaatgaccctccactgg
acacctcctggccagcccaatggagtgcttattggatatctgctgcagtaccaacagatt
acagagagtgatgacagccccatgcaggtggagacaatagatgaccccacagtcacccac
atcaccctgaagaacctggaccataagagcgactaccgtttctacctcagggggcggact
gctgctggggatggagtacctataacgatgaagggtgccactatgctggatggagtagtt
cctatggagatcagcctgtctgtgggggaaaacgcagttaactttagctgggtacctgaa
aagagacacaggaatgttggtttccagatccaatacagcaacaagaacgatggcaataaa
tggaaggcgacagagaaggtgaactcctctcagtctttctaccagctccagggcttgact
cctggctcccaatattctttccaatttatctacaacaacacagtcttcttcaacactgat
atcaagacagaaggaacaggagtaacagagatgcagccaagctttgcaacacagggctgg
ttcattggcgttgtgagcgccattggactgttgttgctgatcctgctcatcctctgcttc
attaagaggagtaaagggggaaagtactcagtgaaagataaagaggagggcccgatggac
tcggaagctcggcccatgaaggatgaaactttcggagagtacagatctctagaaagtgat
cttgaggaaaagcaaacagccagccagccgtccctgtgtgagaagagcaagctgtacagc
gaagacaacctcgacttcaatggcagcagtgccatgaccacagagctcaacatggatgag
tctctggctagccagatcagtcgtcccagtggcggtccagaaggtttcctgccagagaac
gccccgctgaaccccactaccttctctcccgccaccaatggcgtgcccaactcagtcacc
atcctcgattaa
DBGET
integrated database retrieval system
