Oreochromis niloticus (Nile tilapia): 100703960
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Entry
100703960 CDS
T06104
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100703960 (vps53)
Membrane trafficking [BR:
onl04131
]
Protein recycling
Others
EARP complex
100703960 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
100703960 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
hAT-like_RNase-H
Syndetin_C
Laminin_II
COG5_N
VPS51_Exo84_N
PsaD
Sec8_N
NBD94
Motif
Other DBs
NCBI-GeneID:
100703960
NCBI-ProteinID:
XP_005474739
Ensembl:
ENSONIG00000004996
LinkDB
All DBs
Position
LG14:19090137..19117281
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AA seq
831 aa
AA seq
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MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLLDYEE
KYGRMFPEEWCMTERIAVEFCHITRAELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDIPGQKRPDSPLDSTNPFLEDEAGEEAGTEKDEDLTKPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSTNSGGLTISSLLKEKEVSEA
AKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILELKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaatttgctgaagatctagaggctattttgcatctaacc
ccagaggtgcagctagccattgaacaggtattccccagccaagacccgctggatagagcc
gacttcaatgctgtggaatacatcaacacacttttccccaccgagcagtccttggctaat
atcgacgatgtggtaaacaaaattcgattgaagatccggcgtctggatgacaacatcagg
acagttgtgagaggccaaaccaatgtaggccaagatggcagacaggctttggaggaggcc
cagatagccatccagcagctctttggaaaaatcaaagacatcaaggacaaagctgagaag
tctgaacaaatggtcaaggagataacgagggacataaagcagttggaccatgccaagcgc
cacctcactacttccatcaccaccctgaaccacctgcacatgctggcggggggtgtcgac
tctttagaagccatgaccagaaagaggcagtatggtgaggtggccaacttgctgcaggga
gtggtcaacgtgcttgaacatttccacaagtatatgggcataccccagatcagacagcta
tcagagagagtaaaggcggcacagagtgagctggggactcagatcttggcagattttgaa
gaagccttcccctcacagggctcgaagagaccaggtgggcccagtaacgtgctgagggat
gcctgtctggtggcaaatgtactcgacccacgcatcaaacaagagatcatcaagaagttt
attaggcagcacctctccgagtatctggtcctcttccaggaaaatcaagatgttgcttgg
ctcgacaagatcgatcggcgctatgcttggatcaagcgccaactgttggactatgaagaa
aaatatggacgcatgtttcctgaagagtggtgcatgacggagcgtatcgctgtggagttc
tgccacatcaccagggctgagctagccaaagtgatgcgaacacgggctaaggagattgag
gtgaaactgcttctgtttgccattcagaggaccacaaactttgagggcttgctggccaaa
cgcttcacgggatgcactttgacggacatacctggacagaagaggccagacagcccacta
gactcaactaacccctttctggaggatgaggcaggagaggaggcgggcacagaaaaggat
gaagatctgactaagccaaagaagcccaaagctccagacaaccctttccatggcattgtc
tccaaatgctttgaacctcatctatacgtctacatagaatcccaagacaagaatctgggt
gagctgattgaccggtttgtggctgatttccgggcacaaggccctcccaaggctggcacg
gaggagggtggagcagtactgcccagctgtgctgacctctttgtctattacaaaaagtgt
atggtgcagtgctcccaactaagcactggagaaccgatgatagccctcacaaccatcttc
cagaaattcctcagagagtatgcctggaagatcctctctggcaacctgcctaaatccagc
actaacagcgggggtcttaccatcagcagcctgttgaaagaaaaagaagtctctgaagca
gcaaagttcactgtagacgagctctgcctgatctgtagcatcctgagcactgcggagtac
tgtctggctacaacacagcagttggaagagaagctgaaggagaaggtagataaagtcttg
gtagagagaatcaatttgacgggggagatggacaccttcagcactgtgatctcaaatagt
atccaactgcttgttcaggatcttgatgctgcttgtgatcccgcactaactgctatgagc
aagatgccgtggcagagtgtggagcatgttggtgaccagagtccttatgtgacatccatt
ataatgcacattaaacaaaatgtgccaattatcagagacaatctcgcctccacacgcaaa
tatttcacacaattctgcatcaagttcactaattctttcattcccaaattcatcaaccac
ttgtttagatgtaagcctatcagcatggtgggagctgaacaacttctcctcgacactcac
tccttgaagacggtcctgttggatctgccctccataggctcccaggtgctccgcaaggca
cctgccagctacaccaagatagtggttaaaggcatgactcgtgcagagatgatacttaag
gtggtgatggccccacatgaacctccggtggtgtttgttgataactacattaagctcctg
gctgatggcaatcctgagaccttccagaagattctggaattgaagggcctgaagcgcagc
gagcagagcagcatgctggagctcttcaggcaaaggttacccactccgccctcgggggca
gacggcgggccctctctgtccttcagtacccccacccctgagcaggaatcctcacgtatc
cgcaaactagagaagctcattaagaagaggctgtga
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