Oreochromis niloticus (Nile tilapia): 100704180
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Entry
100704180 CDS
T06104
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100704180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100704180
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100704180
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100704180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
100704180
NCBI-ProteinID:
XP_019222123
Ensembl:
ENSONIG00000002985
UniProt:
I3J4E8
LinkDB
All DBs
Position
LG13:28612510..28630598
Genome browser
AA seq
852 aa
AA seq
DB search
MKEMSSTMPSGQQPQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERTDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPADRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK
IEATHVKKKQLHQYLPPEVVQKKKRSIAELNRSSNGGSSKRFSLDNSHLDSSRDTDSGTP
FNSPPSKTSKPASDTDDSVSPPKQLFVEGSPAPVAAAPPAAAAAAPPAVVAAPLPAPVAA
AAKDQGMSIPVIGSKPPLKAKPPSPPASSSITGSAKPTATSSPKEEPNGLEDSVNGAPSK
RPHSPTQEDPAKRPKNTDAVSNDDATFKEPYPPSSDPQTHGEASSITSLAGSKAKPIPTI
DTSRTQRLPSMELPDASSPLPASNSCRVVKNSIKLALNRHNITPPKPPVFEDTLTTDAPA
ASEEKGMSIPVIGSKHVTSKHVVPPIGSSIPTLVSRVVDPLNGAASKRPHSPSSEEQAKR
LKETEKARIHIA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcaccatgcctagtgggcagcagcctcagaaacactatggcatc
acctctgcgattagcctcgcgcccccaagagaaatagaccaccactacaccaagaagctc
tgcgatgcaatgaaaccttttggagtttttgaagatgaagaagaactcaaccatagactt
gcagttcttgggaagctgaataactttgttaaagaatggattgcagagatcagtgagtta
aagaaccttccaccatcagctattagctgtgttgggggcaagatatttacatttggttca
taccgacttggagtgcacacaaaaggagctgatattgatgccttatgtgtggctccacgg
catgtagaaagaacagactttttccagtctttctttgagaaattgaaacagcatgaagag
attaaagatctcagggctgttgaggatgcttttgtaccagtgataaaattcaaatttgat
ggaattgagattgacctgctttttgccagattggctttacaatccattccagacaacctg
gacctgaggggagactccatcttgagaaacttggacattcgatgtatccgcagccttaat
ggttgtcgagtaactgatgaaattttgtacctggtgccaaacaaagagaacttcagactg
acactgagagccatcaaactctgggcaaaacgtcgaggaatctactccaacatgctgggc
tttctgggtggagtgtcatgggccatgttggtagccaggacctgccagctataccccaat
gctgtggctgccacacttgtccataagttcttcttggttttctctaaatgggagtggccg
aatccggtgcttttgaaacagcctgaggatagtaatttaaatttgcctgtgtgggaccca
agagtgaacccagctgacagatatcacctgatgcccatcatcacacctgcctatccccag
cagaactccacatacaacgtctccacgtctacacgtaccatcatgagcgaggagttcaaa
tacggtctcagcgtcacagatgagattcttcagggcaaagcagagtggtccaaactgttt
gagccgcccaactttttccaaaaatacaaacattacattgttctcactgccagtgcatcc
acagaagaaaaccacttggaatggatcggcctggtggagtcaaagatccgtgttctggtg
ggaaacctagagaggaacgagtacatcaccctggctcatgtaaacccccagtcattcccg
ggatctaaagagaaccgtaacgagaacgattttgtgtcgatgtggtttattgggatcatc
tttaagaaggtggagaatgcagagagtgtgaacatagacttgacatatgacatccagtct
ttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggaagggatgaag
attgaagcaacacatgtgaagaagaagcagctccatcagtacctgcctcctgaagtggtg
cagaagaaaaagagaagcatagcagagttgaaccgtagttctaatggtggcagctctaag
cggttctcccttgacaacagccacctggacagctccagagacacagactcagggactccc
tttaactccccgcccagcaaaacctccaagcctgcatctgacacagacgacagcgtcagt
cctcctaagcagctttttgtggagggttctccagcacctgttgcagctgctcctcctgct
gctgctgctgctgctcctcctgctgttgttgctgctcctcttcctgctcctgttgctgct
gcagctaaagaccagggcatgtccatccctgtcattggttcaaaacctcctcttaaagca
aagcctccttccccaccagccagcagctccatcaccggcagcgcgaagcctaccgccacc
agcagccccaaagaggagcccaacggcctggaggactcagtcaacggagctccttccaag
agaccacactcacccacacaagaggacccggccaagaggccaaaaaacacagacgcggtg
tcaaatgatgacgctaccttcaaagaaccatatccaccctcgtctgacccccaaacacac
ggagaagcatccagcattacttctcttgctggatcaaaggcaaagcccattccaaccatc
gatacctcaagaacacaaagacttcccagcatggagctgccagatgcctcctcgcctctc
cctgccagtaacagctgtcgtgttgtgaaaaattccattaaactggccctcaaccgccac
aatatcacacctcccaagccgcccgtgtttgaggacaccctcaccacagacgctcctgct
gccagcgaggaaaagggcatgtccattcccgtgattggctcaaaacatgtgacatccaaa
catgtggtgcctcccatcggcagctccatccccacgctagtgagtcgagtagtcgaccct
ctgaatggagcggcctccaagagaccccactccccatcgtcagaggaacaggccaaaagg
ctgaaagaaacagaaaaggccagaatccatatagcttga
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