Oreochromis niloticus (Nile tilapia): 100704243
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Entry
100704243 CDS
T06104
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03030
DNA replication
onl03410
Base excision repair
onl03420
Nucleotide excision repair
onl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100704243 (rfc4)
03410 Base excision repair
100704243 (rfc4)
03420 Nucleotide excision repair
100704243 (rfc4)
03430 Mismatch repair
100704243 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100704243 (rfc4)
03036 Chromosome and associated proteins [BR:
onl03036
]
100704243 (rfc4)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100704243 (rfc4)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100704243 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
100704243 (rfc4)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100704243 (rfc4)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100704243 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
100704243 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_24
Mg_chelatase
DUF815
Gp44_lid
RuvB_N
SLFN-g3_helicase
AAA_28
AAA_14
AAA_19
AAA_5
DNAX_ATPase_lid
ResIII
KH_DUF2096_C
Cdc6_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
100704243
NCBI-ProteinID:
XP_005451167
Ensembl:
ENSONIG00000019192
LinkDB
All DBs
Position
LG23:complement(29299786..29306807)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQAARPQKDKAVVGPSAEKKAKAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVRDKVKN
FAQLTVAGTRPDGKSCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESIAALVRVSEGDLRKAITFL
QSAARLNVDKEITDCAVIEIAGVVPDKMIDNLLQICFRGTFEKLEVAVRNMVDEGYAATQ
ILTQLHECVIEQDLSDKQKSTITEKMAVVCKCLSDGADEYLQLLSLCSVIMQEASHN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttttgaaaggagcaacagttcaggcagccaggcctcagaaagacaaggca
gtggttggacccagtgcagagaagaaagcaaaggctgttccttgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaggaggaggttgtagcggtgttgaagaagtct
ctggaaggagcagatcttcccaacttgctcttctatggccctcctggaacaggaaagacc
tctaccatcttagctgctgccagagaactttatggtccagaactgtacaggcagagggtg
ctggagctcaatgcctcagatgaaagaggcatccaggtcgtcagagataaagtcaaaaac
tttgctcagctcactgttgccgggacacgcccagacgggaagtcgtgtcctccttttaag
atcatcatactggatgaggccgattccatgactgcaccagctcaagctgctctcagacgg
acaatggagaaggagtctcgcacaactcggttttgtctcatctgtaactatataagcagg
attattgagcctctgacttctcggtgttccaagtttcgcttcaaacctctagccaatcag
atccaggaagaacgtctactagagatatgtgaaaaggagaacctcaagtacaccaaagag
agtatagcagcattggtgcgggtgtctgaaggcgacctgcggaaagccatcacatttttg
caaagtgctgcacgcctcaatgtcgacaaggaaatcactgattgtgctgttattgaaata
gcaggggttgttcctgacaagatgattgacaacctgctccagatctgcttcagaggaaca
tttgagaaactggaggtagcagtcaggaacatggtggatgaaggctacgcagccacacag
atcttgacacagcttcatgagtgtgtcatagagcaggacctgagtgacaagcagaagtcg
actatcacagagaagatggcagttgtgtgtaagtgtctgtcagatggtgcagacgagtac
ctgcagctgttgagtctgtgttcagtcatcatgcaggaggcttcccacaactaa
DBGET
integrated database retrieval system