Oreochromis niloticus (Nile tilapia): 100704317
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Entry
100704317 CDS
T06104
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100704317 (trpc1)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100704317 (trpc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
100704317
NCBI-ProteinID:
XP_003439260
Ensembl:
ENSONIG00000005900
UniProt:
I3JEY5
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All DBs
Position
LG9:complement(17239789..17255310)
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AA seq
795 aa
AA seq
DB search
MHISVLPYSLSVVMAALYHGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTIAIENENLDILQLLLEYGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNVKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRTDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSTEDHVDKRGLLE
DRMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNENKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKD
QEQNRKDWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLFSFTIGLTQLYGKDQKDKENNPPKDCGGIFCEQQSNDAFHTFMGTCYALFWYI
FSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDK
EWKFARAKLWLSYFDDKCTLPPPLNILPSPKTVCYLVTSLSKWICSHTSKGKVKRQNSLK
EWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDL
LGFRTSKYAMFYPRS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagcgtcttgccgtactcgctctccgtcgtaatggcagctctgtaccatggc
acggacgcttcctctccggacaaattcctggccttgaaagacgtgagagaagtgaaagag
gagacgactctggacgagaagctcttcctgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctggaggagaacagacacggcgagctcaacatcaactgtgtggacgtg
ctgggccgagatgcagtgaccatcgccatcgagaatgagaatctggacatccttcagctg
ctcttggagtatggctgccaggcaacagatgctttgctggtggccatagactcagaggtg
gtaggagctgtggacattctccttaaccacaggccaaggagatcttctaagccctctatt
gctaaactgatgcagcgcatccagaatccagagtattccaccaccatggatgtggctcca
gtcatcctggcagcccacaggaacaactacgagatcctgaccatgctgctcaagcaggac
atctctctcccccggcctcacgctgttggctgtgagtgcacgctctgcaatgttaaaaac
aagaaggacagcttacgacactccaggttccgtctcgacatctaccgatgcctagccagc
ccctctctcatcatgctgacagaggaagatcccatactcagggcctttgagctgagcgca
gacctaaaggagctcagtctcgttgaagtggagttcagaactgactatgaggaactggca
aagcagtgcaagatgtttgccaaagacctgctggctcaggctcgaaactctcgagagcta
gaagtgattctcaaccacacatccactgaggatcatgttgacaagagaggcttactggag
gaccgcatgaacctcagtcgacttaaactggccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctcaacactgtctggtttggagagatggccagctac
cgacgcaagcacacctgtctaaaaatggccacagttctgagcgtggccatgctttggcct
ctcctttctgtctgctaccttctggtgccacgctcccgtgttggccaaataatccatacc
cctttcgttaagttcatcatccacagcgcctcctacttcaccttcctgctgctgcttaac
ctgtactctctggtctacaacgagaacaagaagaacacgatgggccccgctcttgagatg
attgattacctgctcatcctctggatcataggaatggtgtggtcagatgtgaagcgtctg
tggtatgaggggctggaagactttctggaagagtctaggaaccagctgagttttgtgatg
aattccctctacttagccacctttgctctgaagattgttgctcatagcaagtttaaagat
caggagcagaacaggaaggactgggatgccttccatcccatcctggtggccgagggactg
tttgcctttgccaacgttcttagttacctgcgacttttcttcatgtacaccacgagctcc
atactgggccctctacagatctccatgggacaaatgctgcaggagtttggaaagtttttg
ggcctcttcctgcttgtgttattctccttcaccattggactcacccagctctatgggaag
gaccagaaagataaggaaaacaatccacccaaggactgcgggggcatcttctgcgagcag
cagagcaatgacgcattccacacatttatggggacctgctatgcactgttctggtacatc
ttctccctggcgcacgttgcactcttcgtcacccgcatcagctacacagaggagctgcgc
tcttttgtcggcgccatgatcataggcacctacaacatcgtggtggttattgtgctgacc
aagctgctggtggccatgctccataaaagcttcaggcaaattgctaatcacgaggataaa
gagtggaagtttgcccgggccaaactgtggctcagctactttgatgacaagtgcacgctg
cctccacccttaaacatcctcccttctccaaagactgtctgctacttggtgaccagccta
agcaagtggatctgttcacacacctcgaagggcaaagtgaagagacagaacagtctgaag
gagtggaagaacctgaagcagaagcgggatgagaactaccagaagatcatgtgctgtcta
gttcaccgctacctgacctccacccggcagaagatgcagagcacagaccaggccacggtg
gaaaatctgaacgaccttcgccaagacctgtcaaagtttcgcaatgagatgagggacctg
ttgggtttccggacctccaaatatgccatgttctacccaaggagctaa
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