Oreochromis niloticus (Nile tilapia): 100704409
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Entry
100704409 CDS
T06104
Name
(RefSeq) integrin alpha-IIb isoform X1
KO
K06476
integrin alpha 2B
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
onl04810
Regulation of actin cytoskeleton
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100704409
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100704409
09142 Cell motility
04820 Cytoskeleton in muscle cells
100704409
04810 Regulation of actin cytoskeleton
100704409
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100704409
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100704409
04515 Cell adhesion molecules [BR:
onl04515
]
100704409
04090 CD molecules [BR:
onl04090
]
100704409
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100704409
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100704409
Cell adhesion molecules [BR:
onl04515
]
Integrins
Integrin alpha subunits
100704409
CD molecules [BR:
onl04090
]
Proteins
100704409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
100704409
NCBI-ProteinID:
XP_005469260
Ensembl:
ENSONIG00000009206
LinkDB
All DBs
Position
LG4:complement(35237010..35272387)
Genome browser
AA seq
1074 aa
AA seq
DB search
MCVFRCVCVLLCVTLGVSLNLLDEVMFRGPTGSLFGFSVDFHTINNKSFVVIGAPKANTS
QSGVTEAGGVFLCPWSSRGRDCDIIDFDLTGDEVHRSSGLLFLSLKSQQWFGAAVRSVGS
THLLACAPLFHWNVQRGGVESGITPVGNCLILEHKTGNSTPFSPCRGLMMEEDYKRMHNR
NDQRYCEVGFTADVTKDGRLVLGAPGSFFFQGQVITVGVDDIINSGKSDDPIKYVAGISQ
SDERGGYDVYHGYSVASGLLTGDSTPDYLVGVPNDRNTAGTVKIYDGRSTGSLRVHHTFL
GAQVASYFGHSVAVADVNSDGLDDVLIGAPLFMDRVKEQLQERGQVVLYLQKKTFSSQPD
QSLIGLSLYGRFGSALAALGDLDMDGYQDVAVGAPWSGESGQGQVFIYLGNSNGLSGTPS
QVINSPLPSRTAFGFTLRSGADIDGNGYPDLLVGAWAADRAFVYRSWTVIRSRVYVSLLP
DFLNPDVKLCHREKQSVSCFVIQMCVHLSGHRIPEETALEVELKLDRMKQPMARRTLLLL
ANQPQETMEITIKRKVGVACVNRTAYLRSEEEVRDKLSPIFITAHISLLNTTQRALLHGQ
THTATQTRIILDCGADHVCVPELKLSAEPASDTVFVGGDQSVLLLVSAMNSGEGAYETEL
VVQIPEHTHFQSSQGVNGLVCMQRKENQTVVVTCDLGNPMRQGHKLQTGLLFSVGYLEEV
ESHITFNLRIRRYAQFLLVHCRHVWSLCHHPPVRLCPSKNSVNSSSNEVTVEVQVEAEAT
LQIRGGSSPQDIVLPLPDWQPAVHPGSLEEVGPLVEHVYEVRNQGPSAVNARLTVEFPST
WRHHFLLYIFSNASEESLSCWTLNTSQIDPFKLAGNSSGVSAVSPSVQQEEPNSHRQTVH
VNCSSGKAGCVRFVCDVTDLGRGFSAVIRISARLWTNTLIETHQNYELVSFATYDVISTS
SKVQPLLLDSGHTQTQLRVLWRPDEKTVPIGYIILSVICGLLLLCILCFIFWKSSDPCMA
LICVPGASRVSSSCRCEVKVSQVTPVHTVYLSKNKFCNSGLSDVSPYGSMWPNG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgttcaggtgtgtgtgtgtgctgctgtgtgtgactctgggtgtgagtctgaac
ctgctggatgaagtcatgttcagaggaccgacaggaagtctgtttggattctccgttgac
tttcacaccatcaataacaagtcctttgttgtcattggagctcccaaagccaacaccagc
caatcaggagtgactgaggcagggggtgtgttcctctgcccctggtcatccagaggcagg
gactgtgacataattgactttgatctgacaggtgatgaggtccaccgcagttcaggtctg
ttgtttctcagcttaaagagccagcagtggttcggcgcagcggtgcgatcagtcggcagc
acacatctgctagcatgtgcgccgctcttccactggaatgttcagaggggaggggtggag
tcagggataacacctgtggggaactgcctcatattggaacacaagacaggaaactccacc
cccttctccccctgcagagggctcatgatggaggaagactacaaacgcatgcacaacaga
aatgaccagcgatattgtgaggttggcttcaccgctgatgtcaccaaggacggtcggcta
gtgctcggagctcccggaagcttcttctttcagggtcaggtgatcactgttggtgttgat
gacatcatcaacagtgggaagagtgatgatcctataaaatatgtggcgggcataagccaa
tcagatgagaggggaggctatgatgtttaccacggttactcagtggccagtggcctgctg
actggagactccacaccagattatctggtcggtgttccaaatgacagaaacacagcagga
acagtgaagatctatgatggaagaagcactggatctctcagagttcaccacacctttctg
ggagctcaggtggcgtcatattttggacacagtgtagctgtggccgacgtcaacagtgac
ggtctggatgatgtgctgattggagctccgctcttcatggacagagtgaaggagcagcta
caggagagaggacaggtggttttgtacctgcagaagaagactttttcctctcagccagac
caatcactgattggcctttccttgtacgggcgttttggctctgccctcgctgcactgggt
gacctggatatggatggttatcaagatgtggctgttggtgccccctggtcaggggaaagt
gggcagggccaggtgttcatctacctgggaaacagtaatggactgtcaggcacaccctcc
caggtgattaacagcccactgcctagcaggacagcgtttggctttactctgaggtccggt
gcagacattgatgggaatggatacccggacctgctggttggagcgtgggctgcggatcga
gcatttgtctacaggtcttggacagtgatccggtccagagtctatgtgtctctgctgcca
gacttccttaatccagatgtcaaactctgccatcgagaaaagcaatctgtttcctgtttc
gtcattcagatgtgtgtccacctatcaggtcacagaattccagaggaaacagctctggag
gtggaactaaagctggataggatgaagcagccaatggcccgacggaccctgctgctcttg
gccaatcagccacaagagacgatggagataacaattaaaaggaaagtgggtgtggcctgt
gtgaatcgcacagcatacctgagatctgaagaagaagttcgggataagttgagtccaatc
ttcatcactgctcacatcagcctcctcaacaccacccagcgtgctctcttacatggacaa
acacacactgcaacacagaccaggatcatcctggactgcggggccgatcacgtctgtgtt
cctgagctgaagctgagcgctgaacctgcatcggacactgtgtttgttggtggcgatcag
tcagtgttgctgttggtgtcggccatgaacagcggtgagggagcatacgagaccgagctc
gtggtccaaatccctgaacacacacacttccagagcagtcagggcgtaaacgggctggtg
tgtatgcagaggaaggagaaccagactgtggttgttacctgcgacctcgggaaccccatg
aggcaaggacacaagctgcagactggtctcctgttcagcgtcggttacctggaggaggtg
gagagtcacatcacctttaacctcagaatacgcaggtacgcacagtttctgctggttcac
tgtaggcacgtttggtcattatgtcaccatccgcccgttcgtctatgtcccagtaagaac
tctgtgaactcgagcagtaacgaggtgacagtggaggttcaggtggaggccgaggcgacg
ctgcagattagaggaggctcttcccctcaagacattgtcctgcccctccctgattggcag
cctgcagtgcaccctgggagtttagaggaagtgggtccactggtggaacatgtctacgag
gtgaggaatcagggcccaagtgcggtcaatgctcggctgacggtggaattcccctccacc
tggcgacatcacttcctgctctatatcttctccaacgcatctgaagaatctttgagctgc
tggaccctgaacacatcacaaattgaccctttcaagctggctggaaactcctcgggtgtg
tctgcagtttctccatcagtccagcaggaggagccaaactcacacagacagactgttcat
gtgaactgcagcagtggtaaggcaggctgcgtcaggtttgtgtgtgatgtcacagacttg
gggcggggcttcagtgcagttatacgaatctcagcccgactgtggacaaatacacttata
gagactcatcagaactatgagctcgtttcctttgcaacttatgatgtcatcagcacatca
tcaaaggtccaaccgctactgctggacagtggacacacacagactcagctcagagtattg
tggcgtcctgatgagaaaactgttcccattggctacatcattctgtcagtcatctgtggg
ctcctcctcctctgcattctctgtttcatcttctggaagagctctgacccttgtatggct
ttaatctgtgtgccgggagcttcacgggtgagcagctcctgcagatgtgaggtgaaggtg
tcccaagttacacctgtccataccgtgtacctgagcaagaacaagttctgcaatagcggc
ttgtcagacgtgtctccttatggttccatgtggccaaatggttaa
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