Oreochromis niloticus (Nile tilapia): 100704417
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Entry
100704417 CDS
T06104
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04136
Autophagy - other
onl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100704417 (atg2a)
04136 Autophagy - other
100704417 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100704417 (atg2a)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100704417 (atg2a)
Membrane trafficking [BR:
onl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100704417 (atg2a)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100704417 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
100704417
NCBI-ProteinID:
XP_005467570
Ensembl:
ENSONIG00000005363
UniProt:
I3JD01
LinkDB
All DBs
Position
LG2:complement(20631280..20660360)
Genome browser
AA seq
2017 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLGLDLYNGSGVIKDINLDVWAVN
ELLESLGAPLEIVDGFVSSITVTIPWQALLTDHCTLEVSGLQITCRPKYRTSGGWDSQGW
SSSMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFLDTIVRIEHQ
PLDLETGVALEVHIKRLEYFDEAVRDPASQTAVPVDIHQPPAFLHKILQLSAVQLFYDSN
GIVQGPPEEEHTDSAMASEGEEGEGDDDKEEEEEGEKAKPQVAPLSQPLLIGSCSGFIET
TVKIKQNDMLPGPKLELDGKVGCVHMLLSPDQITHLTDLLAALCIDTEPETKCGGVHSRP
LDSDDLRMIEEDLGKQLGSSPRDDEWETEPDLESFVTGMENGEMFYSMGPAGMTSSVTSV
RSSSELSDSDMESSTHSLASFTQPGSLSAQGIMNCPRRYPVAGCLSSLPQASGRSRGRSH
SGQAEQLKPDALLRMTLGGLTLTLLQEDPQPSRADGASSLAQVSKVFFKELSAFKDSMFS
ERDFHQLRGGFAKACPHSNLRLTGAAVQVTCEMRSGRRQNRAVTSDLSFSRLELLECLWE
DGKPEYCELLQFQKAGLFTVGAAARPCAQLHYSLTEKRLRKGKQQVLRRSSVVRVELAEL
SAELDLDILSRLRSLSKAFSYCPNQTPGPGLVQTHSTELSSSFTLLSPHAVLRLRFPIPD
LRPLPKRRPPTQRAVRQETLVLEMTEFELKHQEAPDLQSEQTTPGQPWAPCLTQLLEASF
TDLHGSYEGWEGSSFPCIRVRKNRDTLPRISVRVRGGEAQGPAAGLSGMNPGLIRDLGAA
FFESHCEFNDKTSSPFSSNRTMFETEEMVIPADPEEMRQFQEQCVAQCQCAVDISMPLAY
ILLPSKQAFQSIYNRINNDLLMWEPPPPPPPSAHSPDHSRHHQDEFQLCKSAFRLDSDSE
EDECQYYLASESSGKSHPMAPRPNHNLSLLSLTVIIGKGRLQARTDKKEDQSHGELVLDL
EGGKIFSVAQHQNDPNLSFLCLESRRVELYHQAVLKDTPIPQRLEMPSFMPPKHLDLTIY
PTEVGVSSVSGREGEVQMLSTAIKITLDPQRNVKEFLVALRLQGATMRHYMTQTNHSWHE
QLVDFLDVIDDPILGYTAPAVITVLHTHLATCAVDYRPLYLPLRVLFTAESFSLSSNIIV
DTATFHLRFILDDSALYLSDKCETETVDLRRDYVCVLDIDLLELAITTWKGSDTGKLSQP
LFELRCSNNVVHLHTCADSCAALVNLLQYLVSQGDLHPPPRHTSPTEIAGQKLPLSESPA
SMLPCPPAETAEINQYDLADALIDTEKSHRDESLEPGSPSMPRSSPVSVYLFPDEASKHG
PSVLQGELDGLVATATEAQADMMSEEGSEGSTDNDDFCILEAPGMGIPPRDGEPTVTVLC
EGPIRVKDSHFSRPRGSSDLLRAPSRFPVPQSRVVLREISVVWHLYGGKDFGGRPMSLHA
QNANRGRSVPAGVRGSPSRSAPSSRPQNSWRSAGGIGRQHSLLMEIQLTKVSFQHESYPV
AVAGQDGEGSAAPAVGVGPGGEQPLSRQVFIVQELEVRDRLASSQINKFLYLYTSESMPR
RAHSNMLTVKALQVCPESGLGGPECCLRVSLLPLRLNIDQDALFFLKDFFSNLASSVNPY
LPVDPAAEVKADFSQKGSEDLEMAAAAASLGPDLTASVETTYSEQSSSSAGSSTSSDQPI
YFREFRFTSEVPIWLDYHGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDK
VIQYAVTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGRIIRGLQ
RGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLNRYAITEGRATSSRPRRV
AQPADLREGVAKAYDTVREGVIDTAQQLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRPL
IVASEATSNLLGGMRNQIKPDARKEDFLKWRTEDAQE
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccttggtcgggctcaatcaagaagcgggcctgtcggtacctt
ttacagcactacctcggtcactttttgcaggagcgattgagcctcgatcagctgggcttg
gacttgtacaacggcagcggtgtcatcaaggatatcaacctcgatgtctgggcggtcaat
gagcttttggagtccctgggggcccctctggagatagtagatggctttgtgagcagcata
acggtgaccatcccttggcaggctctcttgactgatcactgcaccttagaggtttctggt
cttcagataacatgccgacccaagtaccggaccagtgggggctgggactcgcaaggttgg
tcgtccagcatgacctccagcatgcagctggctcaggagtgcctaaaggacccccctgag
gcttcagaggagccccctgccccactggaggggcttgagatgtttgcacagactattgag
acggtccttcgtcgcattaaagtcacctttctagacactatcgtccgcatcgagcaccag
cccctggacctggaaacaggcgttgccttagaagtgcacattaaaaggctggagtatttc
gacgaggcagtgcgagatccagccagccagactgccgtgcctgtcgacatccaccagcca
cccgccttcctgcacaagatcctccagctgagcgctgttcagctattctatgatagcaat
ggcatagtacagggtcctcccgaggaggaacacacagattcagccatggctagtgaggga
gaggaaggtgaaggcgatgatgataaggaggaggaggaggaaggggagaaggcaaagcca
caagttgcccctctatctcagccgctcctcataggaagctgctccggtttcattgagacc
accgtcaagatcaaacagaacgacatgctgcccggaccaaagctggagttggatgggaaa
gtgggctgtgtccacatgctgctgtctcctgatcaaataacccatctgacagacctgctg
gcagccctctgtatagacactgagccagagaccaagtgcggcggagttcacagtcgtccg
ttagactcggatgacctgcgaatgattgaggaagacctcggtaagcagctcggctccagt
cccagagacgatgagtgggaaactgagcctgacctcgagtcctttgtcaccggcatggag
aatggagaaatgttttactctatgggtcctgctgggatgactagcagtgtgacatctgtc
cgctccagcagtgagctgtcagacagcgacatggagtcttccacacacagtctagccagc
ttcacacagccgggatcgctgtctgcacagggcatcatgaattgtcccaggagatatcct
gttgctggctgtctgtctagtctaccccaggccagcggccgcagtagaggacgatcacac
agcggccaggcagagcagctgaagcctgacgcgttgctgcgaatgacccttggcggactc
actctaacccttctgcaggaggatccgcaaccctccagggctgacggagcctcgtcattg
gctcaggtgtctaaggtgtttttcaaggagctgagcgccttcaaggacagcatgttcagt
gaaagagacttccatcaactgagaggcggattcgccaaagcctgcccacactcaaatctc
agattaacaggagcagcggtgcaggtcacctgtgagatgcggagtgggagacgccaaaac
agggctgtgacctctgacctttccttcagcagactggagctgttagagtgcctctgggag
gacggaaagccggagtactgtgagttgcttcagttccagaaagctggtctgttcacagtt
ggagctgcagccagaccgtgtgcccagttacactacagcctcactgaaaaacgcctgcgt
aagggcaagcagcaggtgttgcggcggagcagcgttgtgcgagtggagctggctgagctt
agtgccgaactggatctggacatcctcagccgcctgaggagcctcagcaaagccttcagc
tactgtcccaaccagacacctggaccaggactcgtacagactcacagcactgagctcagc
tcctccttcaccctcctgtcgcctcacgccgtcctcagacttcgtttccccatacctgac
ctgcggcccctcccaaagcgtcggcctccgacccagagggcggtgcggcaggagaccttg
gtgttggagatgacagagtttgagctgaaacaccaggaggccccagacctgcaaagtgag
cagactacacccggacagccgtgggccccctgcctcacccagctgctggaggcctccttc
accgacctgcacgggtcatatgagggctgggagggaagctctttcccttgtatcagagtg
aggaagaaccgggacactctgcccaggatatcagtgcgtgtgcgaggaggtgaggctcag
ggcccagcagctggtctgagtggcatgaacccgggcctcatcagggaccttggtgccgcc
ttctttgaaagtcactgtgaattcaacgacaaaacgagctctcctttttcttccaaccgc
accatgtttgagactgaggagatggtgattccagccgacccagaggagatgcgtcagttt
caggagcagtgtgtggctcagtgtcagtgtgctgtggacatcagcatgccactagcttat
atcctgctccccagcaaacaggccttccagagcatctataacaggatcaataatgatctg
ttgatgtgggagcctcccccgcctcctcccccctcagcccacagccccgaccacagtcgc
catcaccaggacgagttccagctctgcaagtcagcctttagactggactctgactcagaa
gaggacgagtgtcagtactacttggccagtgaatcatctggaaagtcgcatccgatggct
cctcgtcccaaccacaatctgagccttctctccctcactgtgattatcgggaagggtcgc
ctccaagccaggacagacaagaaggaggaccagagtcacggagagctcgtgcttgatctg
gaaggggggaagatattcagtgtagcgcagcatcaaaatgaccccaatctcagtttcctg
tgtctggagagcagacgagtggagctctaccatcaagctgtcttgaaggacacccccatc
ccgcagcggttggaaatgcccagcttcatgcccccaaagcacctggacctcaccatctac
cccacagaggtgggagtgagcagtgtgagcggcagggagggggaggtgcagatgttatcc
acagccatcaaaatcacactggaccctcagagaaatgtcaaggagttcctcgttgccctt
cgccttcaaggtgccaccatgcgacattacatgacgcaaaccaaccacagttggcacgag
cagctggtcgacttcctggatgtcatcgacgatcctattctgggatacaccgcgccggcc
gtcatcactgtcctccacacgcacctcgctacctgtgctgttgactatagacccctgtat
ctgcccctgcgagtgttattcacagcggagtccttctctctgtccagtaatatcattgtt
gacactgccaccttccacctcagattcatcctggatgattctgctctctacctctctgac
aaatgtgagactgaaacagtggacttgaggagagactacgtgtgtgtcctggacattgac
ctgctggagctcgccatcaccacatggaaaggcagtgatacgggaaagctgtctcagccg
ctctttgagctccgttgttccaacaatgtggtccatctgcacacctgtgcagattcctgt
gctgccctcgtcaatctgctgcagtacctggtctctcagggcgacctgcacccgccgccg
cgacacacctcgcccactgaaatcgctggacagaaattaccactgtcagaaagtccagcg
tctatgctgccctgtcctcccgctgaaaccgccgagatcaaccagtacgacctggctgac
gccttaatcgacacagagaagagccacagagacgaaagtttagaaccaggttcaccttca
atgccgagaagctcccccgtctccgtctacctgttccccgatgaagcctcaaagcacggc
ccctctgtccttcagggggagcttgatgggctggttgccacagcgacagaggcgcaggca
gatatgatgtcagaggaaggctccgagggctccaccgacaatgacgacttctgcatcctg
gaggctcccggcatgggcatccctcccagggatggggagcccacggtaacggtgctgtgc
gaggggcccattagagtgaaggatagccatttttcccggccacgtggcagctcagacctg
ctccgagccccgagtcgcttcccggtgcctcagagtagggtagttttacgggagatctct
gtggtctggcacctttacgggggaaaggattttggaggcaggcctatgtctctgcatgct
cagaacgcgaacagaggtcgttcagtccccgctggcgtccgtgggtcaccttctcgctcc
gccccctcctctcgaccgcagaactcttggcgctcagctggaggcatcggccgtcagcac
agcctgctgatggagatacagctcaccaaggtgtcgttccagcatgagtcctacccagtg
gctgtagcggggcaggatggggaggggtcagcagcacctgcggtcggggtcggtcccggt
ggtgagcagccgctctccaggcaggtgttcatcgtccaggagctggaagttcgagaccga
ctggcctcctcacaaatcaacaaattcctctacctctacactagtgagagcatgccccgc
cgagcccactccaacatgttgactgtgaaggccctgcaggtgtgtcctgagtctggcctc
ggggggccagagtgctgtctccgggtcagcctgctgccactgagactcaacatcgaccag
gacgcactgtttttcctgaaagacttttttagtaatctagcttcctctgttaatccttac
ctgcctgtggatcctgcagctgaagtgaaggcagatttctcccagaaggggtctgaggat
ctagagatggctgctgctgctgctagtcttggacctgacctcacagcttctgtggaaact
acctacagtgagcagagttcctcttctgctggctccagcacctcctctgaccagccaatc
tacttccgggagtttcgtttcacatctgaagtgcctatctggctcgactatcatggcaag
catgtcgtcattgaacaagggacgtttgcagggattctgatcggtctggcccaattaaac
tgctccgagctgaaactgaagaggctctgctgcagacacggtctcctcggggtcgacaaa
gtgattcagtacgccgtcacagagtggctgacggacatcaggaagaatcagctgcccggc
atcctgggaggtgtcggacccatgcactcagtcgtccagctgttccacggagtgagggat
ttgttctggctgcctatagagcagtacaggaaggatggacgcatcattcgaggtctccag
aggggggcagcgtcctttggtacctcaacagcatccgctgctctggagcttagcaacagg
ctggtgcaggctatccaggctacagcagagaccgtgtacgacatcttgtctccaacgcct
cctctgaatcgctacgccatcaccgaaggccgggccacctctagtcgacctcgaagagtc
gcccagcctgcagaccttagagaaggagtggccaaggcctacgacactgtcagagaggga
gtgattgacacggcccaacagttgtgcgatgtagcatcccgcggccacgaacagaaaggt
ctccccggagccgtgggcggcgtcctgcggcagatcccgcccactgtagtccgaccttta
atagtggcctctgaagccacctccaatctcctgggtggcatgagaaaccagatcaaaccg
gacgcccgaaaagaagatttcctcaagtggcgcacagaggacgcccaagaatga
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integrated database retrieval system
