Oreochromis niloticus (Nile tilapia): 100704422
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Entry
100704422 CDS
T06104
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04810
Regulation of actin cytoskeleton
onl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100704422
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100704422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100704422
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100704422
Factors involved in mRNA localization
Other mRNA localization factors
100704422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
100704422
NCBI-ProteinID:
XP_003445873
Ensembl:
ENSONIG00000017589
LinkDB
All DBs
Position
LG2:30321628..30347186
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVTAIEDFHKQSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEVNRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICHLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDPVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtccaacgtggacctgctggaggagctg
ccgctcccggaccagcagccgtgcattgaaccccctccctcctctattatgtaccaggcg
aattttgacaccaactttgaagacaggaatgcttttgtgactggcatcgcccgttacatc
gagcaagccacagtccactccagcatgaatgagatgctggaggaaggacatgaatatgct
gtgatgctttacacatggagaagctgttccagagccattccccaggtgaaatgcaacgag
cagcccaacagagtggagatctacgagaaaacggtggaagtgctagagcccgaagtgacc
aagctcatgaagttcatgtacttccagaggaaagccatagaacgcttctgtagcgaagtg
aagcgtctgtgccacgccgagaggaggaaagactttgtgtctgaggcctatctgctcact
ctgggcaaattcatcaacatgttcgcagtgctggacgaactgaagaatatgaagtgtagc
gtcaagaacgatcactctgcctacaaacgggcagctcagttcttgaggaagatggctgat
ccccagtccatccaggagtctcagaatctctccatgtttttagcgaaccacaacaggatc
actcagtgcctgcatcaacagttggaggtgattcccggctacgaggagcttttggcagac
attgtcaacatctgtgtagactattacgagaacaaaatgtatttgacgcctagcgagaaa
cacatgctgcttaaggttatgggctttggtctgtacctgatggatgggaatgtgagtaat
atctataaactagatgccaaaaagaggatcaacctgagcaagatcgacaagttcttcaaa
ctgcaagtggtgccgctgtttggagacatgcagatcgagttgtcacgctacattgagacg
agcgcacactatgaagaaaacaagtccaagtggacgtgcactcagagcagcatctctccg
cagtacaacctgtgcgagcagatggtgcagatcagggatgaccacatccgtttcatctcc
gagctggcgcgctacagcaacagtgaagtggtgaccggctcgggcctggacagccagaag
tcagacgaggagtacagggagctgttcgacctggctctgaggggtctgcagctgctgtct
aagtggagcacacacgtcatggaagtttactcatggaaactggtacatcccacggataaa
ttctgtaataaggactgtccaggcacggcggaggagtatgagcgagccacacgttacaac
tacaccagtgaagagaagtttgccctggtggaggtcattgccatgatcaaagggctgcag
gttctgatgggccgaatggagtcggtgtttaaccaggccattaggaataccatctacgca
gctctgcaggactttgcccaaatgactcttagagaacctctgcgtcaggctgtacgcaag
aagaagaacgttctcatcagtgttctccaggccattcgaaaaactgtctgtgactgggaa
ggagccagggaacctccaaatgacccctgtctgaggggtgagaaggacccgaaaggcggt
tttgatatcaaggtgcctcgtagagccgtcggaccctccagcacacagctgtacatggta
cgcaccatgctggaatccctaatagcagacaagagtggatccaagaagactctgcggagc
agccttgatggacccatagtcacagccatagaagacttccacaagcagtccttcttcttc
acacatttgctcaactttagtgaggccctgcagcagtgctgtgacctgtcccagctctgg
ttcagagaattcttcctggagctcaccatgggccgcagaatccagttccccattgagatg
tccatgccgtggatcctcactgaccacatcctggagaccaaggagccttccatgatggag
tatgtgctgtaccctctagacttgtataatgacagtggctactacgctctcaccaagttc
aagaaacagttcctttatgatgaaatcgaggctgaggtaaacctctgctttgatcagttt
gtctacaagctagcagatcagatatttgcctactacaaagcaatggctggaagtgtcctc
ctagacaagcgcttcagagctgagtgtaaaaattacggcgtaatcatcccgtaccctcca
tcaaaccgctacgagacgctgctcaaacagagacacgtgcagctgttgggtcgctcgatt
gacctgaaccgtctgattacccagaggatctctgcagcaatgtacaagtccctggaccac
gccatcagccgttttgagagcgaggatcttacctctatagtggagttggaatggctgctg
gaggttaacaggctaacccaccgcctcctgtccaagcacatgacgctggacagctttgac
gccatgttccgcgaggctaaccacaatgtctccgccccctacggacgaatcactctccac
gtcttctgggaactcaactttgatttcctccccaactactgctacaacgggtccacgaac
cgctttgtacggacggctattcccttcacccaggagcctcaaagagacaagccagccaac
gtacagccttactacctgtatgggtctaagcctctcaacatcgcatactcccacatatac
agctcctacagaaactttgttggcccgcctcacttcaagaccatctgccacctccttggt
taccaaggcatcgctgtggtgatggaggagctgcttaagattgtcaagagcctgttacag
ggcaccatactgcagtatgtaaaaaccctgatagaagtcatgcccaagatctgccgccta
ccgcgccacgagtacggctccccaggcatcctggagttcttccaccaccagcttaaggat
atcattgagtatgctgagctaaagacggatgtcttccagagcttaagggaggtgggaaac
gccatcctcttctgcctgctcatcgagcaagctctgtcccaggaggaagtgtgtgacctc
cttcacgccgctcccttccagaacattcttcccagagtctacatcaaagagggagagcgt
ctggaggtgaggatgaagcggctggaggcgaagtacgcccctctccacctcgtgcctcta
attgagaggctgggaaccccgcaacaaattgccattgcgcgggagggagacctgctgacc
aaagagcgcctgtgctgtggcctttccatgttcgaggtcatcctaacacgaatccgcagc
ttcctgcaggatccggtgtggcgcggtcctccacccaccaacggtgtgatgcatgtcgac
gagtgtatggagttccaccgcctgtggagcgccatgcagttcgtctactgcatccctgtg
ggcacgcacgagttcacggcagagcagtgctttggggatgggctgaactgggccggctgt
gccatcatcgtgctgctgggacagcagcgtcgctttgacctcttcgacttctgctaccac
ctgctcaaagtccaaaggcaggatggcaaggacgagatcatcaaaaatgtgccgctgaag
aagatggcggatcgcatcaggaagtaccagatcctcaacaatgagatatttgccatcctg
aacaagtacatgaaggcagtggagacggacagttccactgtggagcatgttcgctgtttc
cagcctcctatacaccaatccctggctaccacttgctga
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