KEGG   Oreochromis niloticus (Nile tilapia): 100704563
Entry
100704563         CDS       T06104                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04144  Endocytosis
onl04517  IgSF CAM signaling
onl04530  Tight junction
onl04810  Regulation of actin cytoskeleton
onl05100  Bacterial invasion of epithelial cells
onl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100704563
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100704563
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100704563
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100704563
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100704563
   05100 Bacterial invasion of epithelial cells
    100704563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:onl04131]
    100704563
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:onl04812]
    100704563
Membrane trafficking [BR:onl04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    100704563
Cytoskeleton proteins [BR:onl04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     100704563
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR19_1st WDR55 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd EIF3I Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Rax2 WDR90_beta-prop_4th SH3_3 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 100704563
NCBI-ProteinID: XP_003456928
Ensembl: ENSONIG00000007858
LinkDB
Position
LG4:complement(1991499..2009652)
AA seq 356 aa
MSLYSFGLDPLSCHAWNKDRTQIAVSPNNNAVNIYEKNGKDWVKIHELTEHTGRITGIDW
APQSNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SICYFEQENDWWLSKHIKKSICSTVLSLDWHPNNILLAAGSADLHCRIFSTYIKDIEEKP
GPTAWGAKMPFGEMMLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSISVADATQGKEVTQL
TSDSLPLLSVLYISPTEIVAAGHDCCPYQYTYKGPHSLEFVKKLDIPKQTSKGNMSAMQH
FRNLDKKATEEDTSDLDTLHQNSITQLRIVSLDKAKVVQYSSVSLDGAMVIWDFKA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtcgctgtacagttttggactggacccgctatcctgccatgcctggaacaaagatagg
acccagattgctgtgagtcctaacaacaatgcggtgaacatctatgaaaaaaatggcaaa
gactgggtcaagatccacgagttgaccgagcacaccggacgaatcacaggcatagactgg
gccccgcagtctaatcgcatagtgacatgtgcctccgaccgcaatgcctatgtgtggacc
ctgaaggatggtgtctggaaacctaccttagtcttggtacgcatcaaccgtgcagccaca
tgtgtgaagtggtccccactggagaacaagtttgccctgggcagtggagcccgtcttatc
tctatttgctactttgagcaggaaaatgactggtggctgagtaaacacatcaagaagtca
atttgctctacagtgctgagtctggactggcatcccaacaacattctactggcagcaggg
tctgcagaccttcactgcaggattttctcaacctacatcaaggacattgaggagaagccc
gggcccactgcctggggggccaagatgccttttggggagatgatgctggagcataaagac
tgtggtgggtgggtacacagtgtttctttctctcccagtggagaccagttggcctgggtg
gcccacaacagcagcatcagtgtcgctgatgccacacaggggaaggaggtaacccagctg
accagtgacagtctgccactgctgagtgtcctctatatcagccctactgagattgttgct
gcgggacatgactgttgcccctaccagtacacgtataagggtccacactctctggagttt
gtgaagaagcttgatatcccaaagcagacctccaaagggaatatgtcagcaatgcaacac
tttcgcaacctggacaaaaaggccactgaggaggacaccagtgacctggacacacttcat
caaaacagcatcacgcagctgcgtattgtatcactggacaaagccaaagttgtgcagtac
agcagcgtgagtctggatggagctatggtgatctgggattttaaggcctga

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