| Entry |
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| Symbol |
vsx1
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| Name |
(RefSeq) LOW QUALITY PROTEIN: visual system homeobox 1
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| KO |
| K09335 | visual system homeobox protein 1 |
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| Organism |
onl Oreochromis niloticus (Nile tilapia)
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| Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:onl03000]
100704566 (vsx1)
Transcription factors [BR:onl03000]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100704566 (vsx1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG13:2212209..2216072
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| AA seq |
359 aa
MTGREELSEEKPRVKLLSPGFGIDKSRLHGXGLRSKGFAITDLLGLETDLQARQQPGGAP
GASGPGAEQHGAGPGLGGFSFPGGXLPLGLGFLCSLAAQQPAGAPCFLPGHLPLLQARPD
SHYLQNLEAQREAYSDEECLSDRNDSKTCGNSQKRKKRRHRTVFTSHQLEELEKAFQEAH
YPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIP
LPESILNSAKNGMMGSCAPWLLGMHKKSLEMSKKCSSPPASDSTRSDSFCNASERQGSGE
AREPEEDELMEEEEDEVEEEVAIDLSSSSKQQQQEEGGASIRTASSPRQQSCSESDEHS |
|---|
| NT seq |
1080 nt +upstreamnt +downstreamnt
atgaccgggcgggaggagctcagcgaggagaagccgcgggtgaagctgctgtccccgggt
ttcggcatcgacaagagccgcctgcacggcnccgggctccgctccaaaggcttcgccatc
accgacctgctgggcctggagacggacctgcaggcccggcagcagcccggcggggccccg
ggcgcctcggggcccggggcggagcagcacggggccggacccggcctcggcgggttctcc
ttcccggggggtncgctgccccttggcctcggcttcctatgcagcctggcggcgcagcag
cccgccggggcgccgtgcttcctgcccggacacctgccgctgctgcaggcccggcccgac
agccactacctgcagaacctggaggcccagcgggaggcctactccgatgaagagtgtctg
tcggaccgaaacgactccaaaacctgcggaaactctcagaagaggaagaagaggagacac
cggacggtgttcacctcccaccagctggaggagctggagaaggccttccaggaggctcat
taccccgacgtgtacgcccgggagatgctggccatgaagacggagctgcccgaggacagg
atacaggtgtggtttcagaaccggcgggccaagtggcgtaagcgtgagaagtgctggggt
cgcagcagcgtcatggcggagtatggtttgtacggcgccatggtgcgacactccatcccg
ctgcccgagtccatcctcaactccgccaagaacggcatgatgggatcgtgcgccccctgg
ctgctcgggatgcacaagaagtctttggaaatgtccaaaaagtgttccagccctccggcg
tccgactcgacgcgctccgattcgttctgcaacgcctcggaacgacaaggttctggcgag
gcccgggagccagaggaggacgagctgatggaggaggaagaggacgaggtggaagaggag
gtggctattgacctgtccagctcatctaaacagcagcagcaggaggagggcggagcctca
ataagaaccgcctcttcaccacgacaacaaagctgcagcgaatcagacgaacatagctga |
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